RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GLT8D1Q68CQ7 371 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 ASCC1Q8N9N2 400 aaKnown RBP20.72■□□□□ 0.91
LSM6-202ENST00000502781 TBC1D15Q8TC07 691 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 NR1H4Q96RI1 486 aaPredicted RBP20.72■□□□□ 0.91
LSM6-202ENST00000502781 S100A13Q99584 98 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 GFI1Q99684 422 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 SLITRK2Q9H156 845 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 EXOSC4Q9NPD3 245 aaKnown RBP20.72■□□□□ 0.91
LSM6-202ENST00000502781 JMJD1CQ15652 2540 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 PSPNO60542 156 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 HTR3BO95264 441 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 FAM157CP0CG43 387 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 MMP9P14780 707 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 CALRP27797 417 aaKnown RBP20.72■□□□□ 0.91
LSM6-202ENST00000502781 IL13RA2Q14627 380 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 GLIPR1L1Q6UWM5 242 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 OR8H2Q8N162 312 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 H1FXQ92522 213 aaKnown RBP20.72■□□□□ 0.91
LSM6-202ENST00000502781 UPRTQ96BW1 309 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 SRD5A1P18405 259 aa20.71■□□□□ 0.91
LSM6-202ENST00000502781 FGF9P31371 208 aaPredicted RBP20.71■□□□□ 0.91
LSM6-202ENST00000502781 GPR176Q14439 515 aa20.71■□□□□ 0.91
LSM6-202ENST00000502781 CHST4Q8NCG5 386 aa20.71■□□□□ 0.91
LSM6-202ENST00000502781 OR5D13Q8NGL4 314 aa20.71■□□□□ 0.91
LSM6-202ENST00000502781 PCDHB16Q9NRJ7 776 aa20.71■□□□□ 0.91
LSM6-202ENST00000502781 STUB1Q9UNE7 303 aa20.71■□□□□ 0.91
LSM6-202ENST00000502781 TRAV1-2A0A0B4J238 106 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 CSTBP04080 98 aaKnown RBP20.7■□□□□ 0.9
LSM6-202ENST00000502781 JUNBP17275 347 aaPredicted RBP20.7■□□□□ 0.9
LSM6-202ENST00000502781 SLC22A6Q4U2R8 563 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 AWAT2Q6E213 333 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 OSR2Q8N2R0 312 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 KIR3DL3Q8N743 410 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 NANPQ8TBE9 248 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 SIRPDQ9H106 197 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 C19orf12Q9NSK7 152 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 GHRLQ9UBU3 117 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 KPTNQ9Y664 436 aa20.7■□□□□ 0.9
LSM6-202ENST00000502781 A0A0G2JK05 382 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 A0A1W2PP11 408 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 SHISA3A0PJX4 238 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 SIRPB1O00241 398 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 SERPINA2P20848 420 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 OR3A1P47881 315 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 RBM11P57052 281 aaKnown RBP20.69■□□□□ 0.9
LSM6-202ENST00000502781 RIPPLY3P57055 190 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 PIGYQ3MUY2 71 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 KLF17Q5JT82 389 aaPredicted RBP20.69■□□□□ 0.9
LSM6-202ENST00000502781 OR4S1Q8NGB4 309 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 MRPS24Q96EL2 167 aaKnown RBP20.69■□□□□ 0.9
LSM6-202ENST00000502781 WDFY2Q96P53 400 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 VCX3AQ9NNX9 186 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 ST3GAL6Q9Y274 331 aa20.69■□□□□ 0.9
LSM6-202ENST00000502781 SLC33A1O00400 549 aaPredicted RBP20.68■□□□□ 0.9
LSM6-202ENST00000502781 SLC22A1O15245 554 aa20.68■□□□□ 0.9
LSM6-202ENST00000502781 GTF2F2P13984 249 aa20.68■□□□□ 0.9
LSM6-202ENST00000502781 GABRR1P24046 479 aa20.68■□□□□ 0.9
LSM6-202ENST00000502781 SRP14P37108 136 aaKnown RBP20.68■□□□□ 0.9
LSM6-202ENST00000502781 ARF6P62330 175 aa20.68■□□□□ 0.9
LSM6-202ENST00000502781 RPL31P62899 125 aaKnown RBP20.68■□□□□ 0.9
LSM6-202ENST00000502781 C1orf122Q6ZSJ8 110 aa20.68■□□□□ 0.9
LSM6-202ENST00000502781 PPP1R35Q8TAP8 253 aa20.68■□□□□ 0.9
LSM6-202ENST00000502781 TBX15Q96SF7 602 aa20.68■□□□□ 0.9
LSM6-202ENST00000502781 IFT22Q9H7X7 185 aa20.68■□□□□ 0.9
LSM6-202ENST00000502781 TXNL4BQ9NX01 149 aaKnown RBP20.68■□□□□ 0.9
LSM6-202ENST00000502781 AK6Q9Y3D8 172 aaKnown RBP20.68■□□□□ 0.9
LSM6-202ENST00000502781 MGST3O14880 152 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 DEGS1O15121 323 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 CSN2P05814 226 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 UBBP0CG47 229 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 ZNF44P15621 663 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 HTR2CP28335 458 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 PDCD1Q15116 288 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 C22orf42Q6IC83 251 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 LINC00596Q86U02 117 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 OR6M1Q8NGM8 313 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 SLC25A28Q96A46 364 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 CHST6Q9GZX3 395 aa20.67■□□□□ 0.9
LSM6-202ENST00000502781 TRAV24A0A0B4J272 114 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 SLC17A2O00624 439 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 SMIM18P0DKX4 95 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 CD36P16671 472 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 ERP29P30040 261 aaKnown RBP20.66■□□□□ 0.9
LSM6-202ENST00000502781 GRK1Q15835 563 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 METTL11BQ5VVY1 283 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 TMEM200BQ69YZ2 307 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 GDPD3Q7L5L3 318 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 TMEM104Q8NE00 496 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 OR4M1Q8NGD0 313 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 POM121Q96HA1 1249 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 OR51E2Q9H255 320 aa20.66■□□□□ 0.9
LSM6-202ENST00000502781 A0A1W2PQ09 198 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 M0R1W7 72 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 GEMIN2O14893 280 aaKnown RBP20.65■□□□□ 0.9
LSM6-202ENST00000502781 TOX4O94842 621 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 PSMD7P51665 324 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 SCN1BQ07699 218 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 Q8N7P7 452 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 UNKLQ9H9P5 680 aaKnown RBP20.65■□□□□ 0.9
LSM6-202ENST00000502781 ZNF581Q9P0T4 197 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms