RNA–Protein interactions for RNA: ENST00000502448.5

NFXL1-204, Transcript of nuclear transcription factor, X-box binding like 1, human

TSL 1 (best)

Gene NFXL1, Length 1,760 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFXL1-204	ENST00000502448	NDRG2	Q9UN36	371 aa	Known RBP	4.09	□□□□□ -1.76
NFXL1-204	ENST00000502448	OR51B4	Q9Y5P0	310 aa		4.09	□□□□□ -1.76
NFXL1-204	ENST00000502448	KCNE3	Q9Y6H6	103 aa		4.09	□□□□□ -1.76
NFXL1-204	ENST00000502448	MYOF	Q9NZM1	2061 aa		4.09	□□□□□ -1.76
NFXL1-204	ENST00000502448	SPTBN4	Q9H254	2564 aa		4.09	□□□□□ -1.76
NFXL1-204	ENST00000502448	EP300	Q09472	2414 aa	Predicted RBP	4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	GVINP1	Q7Z2Y8	2422 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	DCHS1	Q96JQ0	3298 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	UBD	O15205	165 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	NDUFA2	O43678	99 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	MT-ND4	P03905	459 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	DAO	P14920	347 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	KRTAP5-9	P26371	169 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	ADORA2B	P29275	332 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	KIR2DS2	P43631	304 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	SULT1A1	P50225	295 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	SULT1A2	P50226	295 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	APOC4	P55056	127 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	CDKN2D	P55273	166 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	PFN3	P60673	137 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	RBMS2	Q15434	407 aa	Known RBP	4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	HIST3H3	Q16695	136 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	IZUMO4	Q1ZYL8	232 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	PAGE3	Q5JUK9	113 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	SKA3	Q8IX90	412 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	C9orf40	Q8IXQ3	194 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	MRGPRD	Q8TDS7	321 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	TMEM230	Q96A57	120 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	CLDN23	Q96B33	292 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	ELSPBP1	Q96BH3	223 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	MAGEB18	Q96M61	343 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	P2RX4	Q99571	388 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	C20orf85	Q9H1P6	137 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	RBM22	Q9NW64	420 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	FAM206A	Q9NX38	181 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	CALY	Q9NYX4	217 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	GLTP	Q9NZD2	209 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	TMEM181	Q9P2C4	612 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	VPS29	Q9UBQ0	182 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	MOK	Q9UQ07	419 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	NDUFAF1	Q9Y375	327 aa		4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	PHF3	Q92576	2039 aa	Known RBP	4.08	□□□□□ -1.76
NFXL1-204	ENST00000502448	CENPVL3	A0A0U1RRI6	287 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	EFCAB10	A6NFE3	127 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	SLC17A2	O00624	439 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	PHYH	O14832	338 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	STX10	O60499	249 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	CNIH1	O95406	144 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	CD37	P11049	281 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	GTF2F2	P13984	249 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	TCP1	P17987	556 aa	Known RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	MAK	P20794	623 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	RPL12	P30050	165 aa	Known RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	P2RY4	P51582	365 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	DVL1P1	P54792	670 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	SLC35A1	P78382	337 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	CD300C	Q08708	224 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	SKP2	Q13309	424 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	TOMM34	Q15785	309 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	CLEC12B	Q2HXU8	276 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	LRRC75B	Q2VPJ9	315 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	C14orf28	Q4W4Y0	310 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	TFDP3	Q5H9I0	405 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	SYT6	Q5T7P8	510 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	WDR74	Q6RFH5	385 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448		Q6ZN92	141 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	ZNF788	Q6ZQV5	615 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	C17orf82	Q86X59	251 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	C10orf107	Q8IVU9	208 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	C2orf15	Q8WU43	125 aa	Known RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	CNRIP1	Q96F85	164 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	RMND5B	Q96G75	393 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	DOK1	Q99704	481 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	SELENOI	Q9C0D9	397 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	ST3GAL6	Q9Y274	331 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	SNX10	Q9Y5X0	201 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	CACNA1B	Q00975	2339 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	FAM186A	A6NE01	2351 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	SDK1	Q7Z5N4	2213 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	LY6G6E	A0A0G2JKS1	128 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	TRABD2B	A6NFA1	517 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	CLDN24	A6NM45	220 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	MAGEC1	O60732	1142 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	IFNA21	P01568	189 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	THY1	P04216	161 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	HCK	P08631	526 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	PSG1	P11464	419 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	CD38	P28907	300 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	SERPINB5	P36952	375 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	OPRL1	P41146	370 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	RPS9	P46781	194 aa	Known RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	TCL1A	P56279	114 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	KRTAP10-9	P60411	292 aa		4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	NUTF2	P61970	127 aa	Known RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	RPL32	P62910	135 aa	Known RBP	4.07	□□□□□ -1.76
NFXL1-204	ENST00000502448	FKBP3	Q00688	224 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms