RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ISOC1Q96CN7 298 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 NIPSNAP1Q9BPW8 284 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 MROQ9BYG7 248 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 TAS2R3Q9NYW6 316 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 SLC7A11Q9UPY5 501 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 SIRT4Q9Y6E7 314 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-236ENST00000498808 A0A1W2PPI3 338 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 SLC2A5P22732 501 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 MAGEA2P43356 314 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 INSL3P51460 131 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 PRRX1P54821 245 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 DIAPH2-AS1Q14236 149 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 HES1Q14469 280 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 MICAQ29983 383 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 C16orf89Q6UX73 402 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 Q6ZSR3 168 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 SLC25A26Q70HW3 274 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 CPOQ8IVL8 374 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 ZNF679Q8IYX0 411 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 RPEQ96AT9 228 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 TM2D3Q9BRN9 247 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 YIPF3Q9GZM5 350 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 RBFOX1Q9NWB1 397 aaKnown RBP12.19□□□□□ -0.46
HDAC6-236ENST00000498808 COPS3Q9UNS2 423 aa12.19□□□□□ -0.46
HDAC6-236ENST00000498808 H3BN98 237 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 AP4M1O00189 453 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 ZNF254O75437 659 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 GLIPR1P48060 266 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 NPBWR2P48146 333 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 RIDAP52758 137 aaKnown RBP12.18□□□□□ -0.46
HDAC6-236ENST00000498808 RPS7P62081 194 aaKnown RBP12.18□□□□□ -0.46
HDAC6-236ENST00000498808 FOXE3Q13461 319 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 GPR50Q13585 617 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 ZNF146Q15072 292 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 UBE2V2Q15819 145 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 SLC35D3Q5M8T2 416 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 ASPHD1Q5U4P2 390 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 CD300LDQ6UXZ3 194 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 ENTHD1Q8IYW4 607 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 ELMOD2Q8IZ81 293 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 C4orf3Q8WVX3 66 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 PCDHB16Q9NRJ7 776 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 GTF2A1LQ9UNN4 478 aa12.18□□□□□ -0.46
HDAC6-236ENST00000498808 DHRS7CA6NNS2 312 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 LOC110117498-PIK3R3F6TDL0 507 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 SIRPB1O00241 398 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 CCDC22O60826 627 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 ENTPD6O75354 484 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 IGKV1D-33P01593 117 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 IGKV1-33P01594 117 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 ELANEP08246 267 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 MRPL3P09001 348 aaKnown RBP12.17□□□□□ -0.46
HDAC6-236ENST00000498808 CALCBP10092 127 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 PTGFRP43088 359 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 GPR12P47775 334 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 SNU13P55769 128 aaKnown RBP12.17□□□□□ -0.46
HDAC6-236ENST00000498808 AESQ08117 197 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 KPNB1Q14974 876 aaKnown RBP12.17□□□□□ -0.46
HDAC6-236ENST00000498808 C17orf58Q2M2W7 97 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 OR11H1Q8NG94 326 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 OR9G1Q8NH87 305 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 RNFT2Q96EX2 444 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 GLS2Q9UI32 602 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 IKZF2Q9UKS7 526 aa12.17□□□□□ -0.46
HDAC6-236ENST00000498808 SAMHD1Q9Y3Z3 626 aaKnown RBP12.17□□□□□ -0.46
HDAC6-236ENST00000498808 ALMS1Q8TCU4 4167 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 HERC2O95714 4834 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 TRBV2A0A0J9YWF9 115 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 TRIM64CA6NLI5 447 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 SPNP16150 400 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 BCL3P20749 454 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 VEGFCP49767 419 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 CFHR3Q02985 330 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 APOFQ13790 326 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 GINS1Q14691 196 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 FAM27D1Q5T7N8 215 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 BCL2L15Q5TBC7 163 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 PLEKHG7Q6ZR37 379 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 Q8IYB0 196 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 FAM58AQ8N1B3 248 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 OR10G2Q8NGC3 310 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 OR4D6Q8NGJ1 314 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 MOB1AQ9H8S9 216 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 ISYNA1Q9NPH2 558 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 OR52A1Q9UKL2 312 aa12.16□□□□□ -0.46
HDAC6-236ENST00000498808 ODAMA1E959 279 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 MAGEB4O15481 346 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-236ENST00000498808 E2F6O75461 281 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 JTBO76095 146 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 OR2H2O95918 312 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 IGHV3-7P01780 117 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 PRKACAP17612 351 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 CCL1P22362 96 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 NFYBP25208 207 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 FUT6P51993 359 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 CDC42P60953 191 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 ASB17Q8WXJ9 295 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 CMTM5Q96DZ9 223 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 COQ2Q96H96 371 aa12.15□□□□□ -0.46
HDAC6-236ENST00000498808 KIRREL1Q96J84 757 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms