RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 DUSP21Q9H596 190 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 ZMAT3Q9HA38 289 aaKnown RBP10.5□□□□□ -0.73
HSPG2-213ENST00000498495 RAB26Q9ULW5 256 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 ING4Q9UNL4 249 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 SF3B6Q9Y3B4 125 aaKnown RBP10.5□□□□□ -0.73
HSPG2-213ENST00000498495 FAM96BQ9Y3D0 163 aa10.5□□□□□ -0.73
HSPG2-213ENST00000498495 A0A1W2PRD5 423 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 A0A1W2PRF3 423 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 A0A1W2PRM7 423 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 DNAJC9-AS1A6NH13 148 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 SIRPB1O00241 398 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 GABRPO00591 440 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 DEGS1O15121 323 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 HOXA3O43365 443 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-213ENST00000498495 RGS10O43665 173 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 PSPNO60542 156 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 GPX5O75715 221 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 OR2H2O95918 312 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF44P15621 663 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 CCL3L1P16619 93 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 IGFBP3P17936 291 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-213ENST00000498495 LMO1P25800 156 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 PTGFRP43088 359 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 UBE2E1P51965 193 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 EDDM3AQ14507 147 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 RSU1Q15404 277 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 SLC9A3R2Q15599 337 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 DDI2Q5TDH0 399 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 Q6YL49 198 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 OR4S1Q8NGB4 309 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 SGCDQ92629 289 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 TNFRSF14Q92956 283 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 OR14A2Q96R54 314 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 OR5M11Q96RB7 305 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 NR1H4Q96RI1 486 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-213ENST00000498495 HEXA-AS1Q9H8Q6 139 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 UNKLQ9H9P5 680 aaKnown RBP10.49□□□□□ -0.73
HSPG2-213ENST00000498495 PAK1IP1Q9NWT1 392 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-213ENST00000498495 FOXJ3Q9UPW0 622 aa10.49□□□□□ -0.73
HSPG2-213ENST00000498495 MXRA5Q9NR99 2828 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 A0A0G2JK05 382 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 A0A0U1RQK1 487 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 hADV38S2A0JD32 116 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 FUOMA2VDF0 154 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 CLDN34H7C241 214 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 MGST3O14880 152 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 NPFFO15130 113 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 HTR3BO95264 441 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 CSTBP04080 98 aaKnown RBP10.48□□□□□ -0.73
HSPG2-213ENST00000498495 CRHBPP24387 322 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 ERVFRD-1P60508 538 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 MEF2CQ06413 473 aaPredicted RBP10.48□□□□□ -0.73
HSPG2-213ENST00000498495 KLRD1Q13241 179 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF273Q14593 569 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 ELP2Q6IA86 826 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 ASCL4Q6XD76 172 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 C11orf42Q8N5U0 333 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 MS4A15Q8N5U1 240 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 TPRX1Q8N7U7 411 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 THRSPQ92748 146 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 C1orf147Q96MC9 270 aaPredicted RBP10.48□□□□□ -0.73
HSPG2-213ENST00000498495 METTL9Q9H1A3 318 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 PCDHB16Q9NRJ7 776 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 TNFRSF19Q9NS68 423 aa10.48□□□□□ -0.73
HSPG2-213ENST00000498495 TRAV8-7A0A075B6U6 113 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 TRBV5-7A0A0A0MS05 114 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 MEX3AA1L020 520 aaKnown RBP10.47□□□□□ -0.73
HSPG2-213ENST00000498495 MEIOCA2RUB1 952 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 TMEM89A2RUT3 159 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 C17orf98A8MV24 154 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 CDRT1O95170 752 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 MAS1P04201 325 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 RNASE1P07998 156 aaKnown RBP10.47□□□□□ -0.73
HSPG2-213ENST00000498495 MELTFP08582 738 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF728P0DKX0 622 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 MAPK3P27361 379 aaPredicted RBP10.47□□□□□ -0.73
HSPG2-213ENST00000498495 ERP29P30040 261 aaKnown RBP10.47□□□□□ -0.73
HSPG2-213ENST00000498495 OR3A4PP47883 348 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 GPR50Q13585 617 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 DOC2BQ14184 412 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 IRF3Q14653 427 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 ACSM3Q53FZ2 586 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 RBM48Q5RL73 367 aaKnown RBP10.47□□□□□ -0.73
HSPG2-213ENST00000498495 Q6P435 159 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 C16orf87Q6PH81 154 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 C12orf54Q6X4T0 127 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 CHST4Q8NCG5 386 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 OR10K1Q8NGX5 313 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 DERL3Q96Q80 235 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF184Q99676 751 aaPredicted RBP10.47□□□□□ -0.73
HSPG2-213ENST00000498495 NKX3-1Q99801 234 aaPredicted RBP10.47□□□□□ -0.73
HSPG2-213ENST00000498495 BLOC1S6Q9UL45 172 aa10.47□□□□□ -0.73
HSPG2-213ENST00000498495 LSM2Q9Y333 95 aaKnown RBP10.47□□□□□ -0.73
HSPG2-213ENST00000498495 PIN1P1O15428 100 aa10.46□□□□□ -0.73
HSPG2-213ENST00000498495 ZNF780AO75290 641 aaPredicted RBP10.46□□□□□ -0.73
HSPG2-213ENST00000498495 PAHP00439 452 aa10.46□□□□□ -0.73
HSPG2-213ENST00000498495 FBP1P09467 338 aa10.46□□□□□ -0.73
HSPG2-213ENST00000498495 HSMCR30P0CW71 290 aa10.46□□□□□ -0.73
HSPG2-213ENST00000498495 FSTP19883 344 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms