RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 MYL6P60660 151 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 BEX3Q00994 111 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 DEFA6Q01524 100 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 GLO1Q04760 184 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 TWF1Q12792 350 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 SELENBP1Q13228 472 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 MAB21L1Q13394 359 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 PMS2P3Q13401 168 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 PRPSAP1Q14558 356 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 SF3A2Q15428 464 aaKnown RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 TRIP13Q15645 432 aaPredicted RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 USF2Q15853 346 aaPredicted RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 DEFB116Q30KQ4 102 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 TTLL9Q3SXZ7 439 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 CDNFQ49AH0 187 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 LINC00483Q53H64 154 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 ACSBG2Q5FVE4 666 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 XKR7Q5GH72 579 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 TCEAL5Q5H9L2 206 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 LY6G6FQ5SQ64 297 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 VAX1Q5SQQ9 334 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 OGFRL1Q5TC84 451 aaPredicted RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 Q5W150 140 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 DCUN1D2Q6PH85 259 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 PLET1Q6UQ28 207 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 C5orf46Q6UWT4 87 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 C12orf54Q6X4T0 127 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 MBOAT1Q6ZNC8 495 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 STRADAQ7RTN6 431 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 SSX9Q7RTT3 188 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 FAM122BQ7Z309 247 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 SMIM15Q7Z3B0 74 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 MRPL52Q86TS9 123 aaKnown RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 TAC4Q86UU9 113 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 TTC5Q8N0Z6 440 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 CYP4Z2PQ8N1L4 340 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 LINC00301Q8NCQ3 95 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 OR1M1Q8NGA1 313 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 OR56B2PQ8NGI1 322 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 OR10G9Q8NGN4 311 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 OR5H6Q8NGV6 325 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 NDNFQ8TB73 568 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 AGR3Q8TD06 166 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 ZFP90Q8TF47 636 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 ESR2Q92731 530 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 YIPF5Q969M3 257 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 TOP1MTQ969P6 601 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 S100PBPQ96BU1 408 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 ISOC1Q96CN7 298 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 SGTBQ96EQ0 304 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 DUS3LQ96G46 650 aaKnown RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 DCUN1D1Q96GG9 259 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 DNAJC1Q96KC8 554 aaKnown RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 C9orf72Q96LT7 481 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 PRRC1Q96M27 445 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 RNF145Q96MT1 663 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 CSPG4P5Q96PW8 444 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 P2RX4Q99571 388 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 KCNS3Q9BQ31 491 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 CCDC32Q9BV29 185 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 BBS2Q9BXC9 721 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 PKIBQ9C010 78 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 ALX4Q9H161 411 aaPredicted RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 BLZF1Q9H2G9 400 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 OR51M1Q9H341 326 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 RANBP3Q9H6Z4 567 aaPredicted RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 RETNQ9HD89 108 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 IMP3Q9NV31 184 aaKnown RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 MED9Q9NWA0 146 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 MCUBQ9NWR8 336 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 UXTQ9UBK9 157 aaPredicted RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 CYB5R1Q9UHQ9 305 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 LGALS13Q9UHV8 139 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 ENPP5Q9UJA9 477 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 ZNF222Q9UK12 451 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 PSMD13Q9UNM6 376 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 ST3GAL6Q9Y274 331 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.62□□□□□ -2.15
CBX3-208ENST00000497498 POLR3HQ9Y535 204 aaPredicted RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 WIF1Q9Y5W5 379 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 PRKDCP78527 4128 aaKnown RBP1.62□□□□□ -2.15
CBX3-208ENST00000497498 MYH7BA7E2Y1 1941 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 GREB1Q4ZG55 1949 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 MYH13Q9UKX3 1938 aa1.62□□□□□ -2.15
CBX3-208ENST00000497498 MYH11P35749 1972 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ROBO3Q96MS0 1386 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 PCM1Q15154 2024 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 GLYATL1P3A0A0U1RQE8 302 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 LOC100506127A0A0U1RQW1 187 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 A0A1W2PP18 115 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 TMEM120BA0PK00 339 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ZNF729A6NN14 1252 aaPredicted RBP1.61□□□□□ -2.15
CBX3-208ENST00000497498 INS-IGF2F8WCM5 200 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 I3L521 148 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SULT1C2O00338 296 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SLC31A2O15432 143 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 RGS5O15539 181 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 AKR7A2O43488 359 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 SGCEO43556 437 aa1.61□□□□□ -2.15
CBX3-208ENST00000497498 ANGPTL7O43827 346 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms