RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 TAS2R3Q9NYW6 316 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 PCDHGB5Q9Y5G0 923 aa13.5□□□□□ -0.25
TRAPPC3-207ENST00000497251 TRGV10A0A0A0MS01 117 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 LEUTXA8MZ59 168 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 OOSP1A8MZH6 123 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 PF4P02776 101 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 GABRR1P24046 479 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 ZNF91Q05481 1191 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 EDDM3AQ14507 147 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 VAX1Q5SQQ9 334 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 CCDC144NLQ6NUI1 221 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 HEPN1Q6WQI6 88 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 UTS2BQ765I0 119 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 TCF23Q7RTU1 214 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 ABHD12Q8N2K0 398 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 CORO2AQ92828 525 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 SLAMF9Q96A28 289 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 EME1Q96AY2 570 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 OR5M11Q96RB7 305 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 TTTY10Q9BZA0 68 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 ZMAT5Q9UDW3 170 aaKnown RBP13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 DNAH3Q8TD57 4116 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 KIAA2026Q5HYC2 2103 aa13.49□□□□□ -0.25
TRAPPC3-207ENST00000497251 TCRBV4S1A1TA0A5B7 111 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 A6NIN4 97 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 F8VVB4 439 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 F8VWA3 439 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 SH2D1BO14796 132 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 OR2F2O95006 317 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 RPP14O95059 124 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 CD34P28906 385 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 SLC6A1P30531 599 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 P2RX3P56373 397 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 SNRPGP62308 76 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 TMEM244Q5VVB8 128 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 MEDAGQ5VYS4 303 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 KCTD20Q7Z5Y7 419 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 TRAPPC6BQ86SZ2 158 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 OR4P4Q8NGL7 312 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 SPSB1Q96BD6 273 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 RBM14Q96PK6 669 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 NEK6Q9HC98 313 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 PCDHB16Q9NRJ7 776 aa13.48□□□□□ -0.25
TRAPPC3-207ENST00000497251 NBEAL2Q6ZNJ1 2754 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 IGKV1-27A0A075B6S5 117 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 A0A1W2PQL4 384 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 PSPNO60542 156 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 LMO1P25800 156 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 ATP6V1E1P36543 226 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 PRRX1P54821 245 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 MTCP1P56278 107 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 Q6ZS46 218 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 LHFPL2Q6ZUX7 228 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 FAM220AQ7Z4H9 259 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 BATF2Q8N1L9 274 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 CHST4Q8NCG5 386 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 OR52N4Q8NGI2 321 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 TENM3Q9P273 2699 aa13.47□□□□□ -0.25
TRAPPC3-207ENST00000497251 SNTNA6NMZ2 147 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 MAGEB4O15481 346 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 IGLV1-47P01700 117 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 IGHA1P01876 353 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 ISG15P05161 165 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 CSN2P05814 226 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 IGLL1P15814 213 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 MNDAP41218 407 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 ZIK1Q3SY52 487 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 SSX6Q7RTT6 188 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 THNSL2Q86YJ6 484 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 OR10H4Q8NGA5 316 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 MBOAT4Q96T53 435 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 MYCBPQ99417 103 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 TBX5Q99593 518 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 SLC25A33Q9BSK2 321 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 HMG20AQ9NP66 347 aa13.46□□□□□ -0.25
TRAPPC3-207ENST00000497251 A0A087X0M5 115 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 A0A1B0GX30 115 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 MPZL2O60487 215 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 ENTPD6O75354 484 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 MPIG6BO95866 241 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 MT-ND2P03891 347 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 FAM106CPP0CH98 169 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 OR3A1P47881 315 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 PDZK1IP1Q13113 114 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 ZSCAN26Q16670 478 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 SAXO1Q8IYX7 474 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 OR51D1Q8NGF3 324 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 OR4D6Q8NGJ1 314 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 DPF1Q92782 380 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 MYDGFQ969H8 173 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 MCRIP2Q9BUT9 160 aaKnown RBP13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 EXOSC4Q9NPD3 245 aaKnown RBP13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 HHLA2Q9UM44 414 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 GMPPBQ9Y5P6 360 aa13.45□□□□□ -0.26
TRAPPC3-207ENST00000497251 LOC107986453A0A1B0GWG9 222 aa13.44□□□□□ -0.26
TRAPPC3-207ENST00000497251 A0A1W2PRX2 142 aa13.44□□□□□ -0.26
TRAPPC3-207ENST00000497251 TOR1AO14656 332 aa13.44□□□□□ -0.26
TRAPPC3-207ENST00000497251 APOL3O95236 402 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms