RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 TLE1Q04724 770 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 TMEM30BQ3MIR4 351 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 ZNF474Q6S9Z5 364 aaPredicted RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 KCTD9Q7L273 389 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 C6orf201Q7Z4U5 140 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 SCCPDHQ8NBX0 429 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 RDH5Q92781 318 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 IGKV1-9A0A0C4DH69 117 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 CDIPTO14735 213 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 GEMIN2O14893 280 aaKnown RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 FXYD4P59646 89 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 FAM89BQ8N5H3 189 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 POC1AQ8NBT0 407 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 EDARADDQ8WWZ3 215 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 MRPL24Q96A35 216 aaKnown RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 BEX2Q9BXY8 128 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 KCNK15Q9H427 330 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 BEX1Q9HBH7 125 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 MFNGO00587 321 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 PLA2G10O15496 165 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 FABP7O15540 132 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 GOSR1O95249 250 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 CLDN14O95500 239 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 IGHV3-13P01766 116 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 APOBEC3AP31941 199 aaPredicted RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 ZP1P60852 638 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 HFEQ30201 348 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 ASCL4Q6XD76 172 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 INO80EQ8NBZ0 244 aaPredicted RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 GTF3AQ92664 365 aaKnown RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 ZNF2Q9BSG1 426 aaPredicted RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 OR6C3Q9NZP0 311 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 AK3Q9UIJ7 227 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 URB1O60287 2271 aaKnown RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 CACNA1CQ13936 2221 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 TRDCB7Z8K6 153 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 CD74P04233 296 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 IL3RAP26951 378 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 PSG7Q13046 419 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 UNC119Q13432 240 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 LINC00303Q3SY05 128 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 C4orf17Q53FE4 359 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 OR10AD1Q8NGE0 317 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 PIK3IP1Q96FE7 263 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 MARS2Q96GW9 593 aaKnown RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 ZNF75AQ96N20 296 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 ALX4Q9H161 411 aaPredicted RBP7.17□□□□□ -1.26
USP54-215ENST00000497106 SAP30LQ9HAJ7 183 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 ZNF224Q9NZL3 707 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 FZR1Q9UM11 496 aa7.17□□□□□ -1.26
USP54-215ENST00000497106 BET1O15155 118 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 CELA3BP08861 270 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 OR4A8P0C604 315 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 DNASE1P24855 282 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 CHATP28329 748 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 SERPINF1P36955 418 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 LUMP51884 338 aaPredicted RBP7.16□□□□□ -1.26
USP54-215ENST00000497106 AP2S1P53680 142 aaPredicted RBP7.16□□□□□ -1.26
USP54-215ENST00000497106 DHODHQ02127 395 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 GLDNQ6ZMI3 551 aaPredicted RBP7.16□□□□□ -1.26
USP54-215ENST00000497106 NLRC3Q7RTR2 1065 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 TMEM104Q8NE00 496 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 FAAP24Q9BTP7 215 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 POFUT1Q9H488 388 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 PPP1R3CQ9UQK1 317 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 NDUFA2O43678 99 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 IFNA2P01563 188 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 CD37P11049 281 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 GNRHRP30968 328 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 POLR2GP62487 172 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP54-215ENST00000497106 LRRC10Q5BKY1 277 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 KDF1Q8NAX2 398 aaPredicted RBP7.16□□□□□ -1.26
USP54-215ENST00000497106 TMEM185AQ8NFB2 350 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 OR4A4PQ8NGN8 299 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 RNF166Q96A37 237 aaPredicted RBP7.16□□□□□ -1.26
USP54-215ENST00000497106 PLPPR2Q96GM1 343 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 CHIAQ9BZP6 476 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 ZNF665Q9H7R5 613 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 SLC2A8Q9NY64 477 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 FREM3P0C091 2139 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 MEIKINA0A087WXM9 373 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 K7EM74 188 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 GOSR2O14653 212 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 HEXAP06865 529 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 GIPP09681 153 aaPredicted RBP7.16□□□□□ -1.26
USP54-215ENST00000497106 IFITM2Q01629 132 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 ZNF695Q8IW36 515 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 SUMF2Q8NBJ7 301 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 GALMQ96C23 342 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 SDHCQ99643 169 aaPredicted RBP7.16□□□□□ -1.26
USP54-215ENST00000497106 SOX7Q9BT81 388 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 OR51I2Q9H344 312 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 TREM2Q9NZC2 230 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 TRGV10A0A0A0MS01 117 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 OOEPA6NGQ2 149 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 HSPB6O14558 160 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 ATF4P18848 351 aaPredicted RBP7.16□□□□□ -1.26
USP54-215ENST00000497106 IGFBP7Q16270 282 aa7.16□□□□□ -1.26
USP54-215ENST00000497106 SRSF7Q16629 238 aaKnown RBP eCLIP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms