RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, human

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PEF1-208	ENST00000496805	GABARAP	H6UMI1	98 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	RAB27B	O00194	218 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	GSTZ1	O43708	216 aa	Predicted RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	NOS1AP	O75052	506 aa	Predicted RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	HTR3B	O95264	441 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	IGHV1-46	P01743	117 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	HLA-DQB1	P01920	261 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	CD55	P08174	381 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	GSTP1	P09211	210 aa	Known RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	PGA5	P0DJD9	388 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	IL7	P13232	177 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	BCL3	P20749	454 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	GATA4	P43694	442 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	COMP	P49747	757 aa	Predicted RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	SNRPD2	P62316	118 aa	Known RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	ACTG1	P63261	375 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	MAB21L1	Q13394	359 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	FAM209A	Q5JX71	171 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	HACD4	Q5VWC8	232 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	TRIQK	Q629K1	86 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	FIP1L1	Q6UN15	594 aa	Known RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	IZUMO1	Q8IYV9	350 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	FAM89B	Q8N5H3	189 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	POC1A	Q8NBT0	407 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	OR10R2	Q8NGX6	335 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	OR10Z1	Q8NGY1	313 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	OR2V2	Q96R30	315 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	ABHD1	Q96SE0	405 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	SDHC	Q99643	169 aa	Predicted RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	GAL3ST1	Q99999	423 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	NRIP2	Q9BQI9	281 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	FN3KRP	Q9HA64	309 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	SCPEP1	Q9HB40	452 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	BARX1	Q9HBU1	254 aa	Predicted RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	FAIM	Q9NVQ4	179 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	CISD1	Q9NZ45	108 aa	Known RBP	10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	IL19	Q9UHD0	177 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	TANC2	Q9HCD6	1990 aa		10.84	□□□□□ -0.67
PEF1-208	ENST00000496805	TRAV18	A0A075B6X5	111 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805		A0A0A6YYD4	124 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	ISPD	A4D126	451 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	C17orf100	A8MU93	164 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	TPD52L2	O43399	206 aa	Known RBP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	SPRY3	O43610	288 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	GRP	P07492	148 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	SFTPB	P07988	381 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	HIST1H1D	P16402	221 aa	Known RBP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	HNF1A	P20823	631 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	VEGFC	P49767	419 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	TNFAIP6	P98066	277 aa	Predicted RBP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	MADCAM1	Q13477	382 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	IL13RA2	Q14627	380 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	MPV17L	Q2QL34	196 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	PCGF3	Q3KNV8	242 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	PRAMEF6	Q5VXH4	476 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	CLEC2A	Q6UVW9	174 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	SNX29P2	Q8IUI4	249 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	OR8H2	Q8N162	312 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	FBXL14	Q8N1E6	418 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	OR51T1	Q8NGJ9	327 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	EMG1	Q92979	244 aa	Known RBP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	TRIM63	Q969Q1	353 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	ERGIC1	Q969X5	290 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	MSI2	Q96DH6	328 aa	Known RBP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	RAB3C	Q96E17	227 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	NICN1	Q9BSH3	213 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	EGLN1	Q9GZT9	426 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	AUNIP	Q9H7T9	357 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	ABCB10	Q9NRK6	738 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	RBFOX1	Q9NWB1	397 aa	Known RBP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	MTCH1	Q9NZJ7	389 aa		10.83	□□□□□ -0.68
PEF1-208	ENST00000496805	MRPS7	Q9Y2R9	242 aa	Known RBP	10.83	□□□□□ -0.68
PEF1-208	ENST00000496805		A0A1W2PQ09	198 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	MFNG	O00587	321 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	CDIPT	O14735	213 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	CA11	O75493	328 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	RHBDL1	O75783	438 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	LPL	P06858	475 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	CSF3	P09919	207 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	TNFRSF1A	P19438	455 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	CFHR2	P36980	270 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	NPBWR2	P48146	333 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	PPOX	P50336	477 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	DEFA1	P59665	94 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	DEFA3	P59666	94 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	ERVK11-1	P61568	191 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	CR1L	Q2VPA4	569 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	SMIM21	Q3B7S5	101 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	PIGY	Q3MUY2	71 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	MOGAT2	Q3SYC2	334 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	SPIN3	Q5JUX0	258 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	WDR82	Q6UXN9	313 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	FAM58A	Q8N1B3	248 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	MUC15	Q8N387	334 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	ITLN1	Q8WWA0	313 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	HPS1	Q92902	700 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	MS4A5	Q9H3V2	200 aa		10.82	□□□□□ -0.68
PEF1-208	ENST00000496805	SPACA1	Q9HBV2	294 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms