RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 RUSC1-AS1Q66K80 236 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 TMEM200BQ69YZ2 307 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 UNQ9370/PRO34162Q6UXP9 181 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 VMO1Q7Z5L0 202 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 TPRX1Q8N7U7 411 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 PXT1Q8NFP0 134 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 ZNF418Q8TF45 676 aaPredicted RBP8.09□□□□□ -1.11
CALD1-223ENST00000496024 THRSPQ92748 146 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 MUL1Q969V5 352 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 SNX22Q96L94 193 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 METTL9Q9H1A3 318 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 PPIL3Q9H2H8 161 aaKnown RBP8.09□□□□□ -1.11
CALD1-223ENST00000496024 TCF7L1Q9HCS4 588 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 ACOT13Q9NPJ3 140 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 FOXJ3Q9UPW0 622 aa8.09□□□□□ -1.11
CALD1-223ENST00000496024 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
CALD1-223ENST00000496024 TRBV23-1A0A0A0MS06 115 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 HSPB6O14558 160 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 DEGS1O15121 323 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 PSPNO60542 156 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 ZNF737O75373 536 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 OR2H2O95918 312 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 CSTBP04080 98 aaKnown RBP8.08□□□□□ -1.12
CALD1-223ENST00000496024 CCL3L1P16619 93 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 CPEP16870 476 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 PSMB9P28065 219 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 MTNR1BP49286 362 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 GP2P55259 537 aaKnown RBP8.08□□□□□ -1.12
CALD1-223ENST00000496024 KLRD1Q13241 179 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 ZNF273Q14593 569 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 PIGYQ3MUY2 71 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 HSD17B12Q53GQ0 312 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 METAP1DQ6UB28 335 aaPredicted RBP8.08□□□□□ -1.12
CALD1-223ENST00000496024 C17orf107Q6ZR85 190 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 ZNF367Q7RTV3 350 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 PHC2Q8IXK0 858 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 SPARTQ8N0X7 666 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 OR8H2Q8N162 312 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 SVOPQ8N4V2 548 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 Q8N7P7 452 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 OR4S1Q8NGB4 309 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 C8orf46Q8TAG6 207 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 SUCNR1Q9BXA5 334 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 YTHDF1Q9BYJ9 559 aaKnown RBP8.08□□□□□ -1.12
CALD1-223ENST00000496024 FAM234AQ9H0X4 552 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 PPA2Q9H2U2 334 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 ISYNA1Q9NPH2 558 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 MRPS28Q9Y2Q9 187 aaKnown RBP8.08□□□□□ -1.12
CALD1-223ENST00000496024 LRRC42Q9Y546 428 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 KPTNQ9Y664 436 aa8.08□□□□□ -1.12
CALD1-223ENST00000496024 CENPVL3A0A0U1RRI6 287 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 MDFIC2A0A1B0GVS7 189 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 A0A1W2PP11 408 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 RNF212BA8MTL3 300 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 VENTXO95231 258 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 OR3A1P47881 315 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 ERVFRD-1P60508 538 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 FABP5Q01469 135 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 BLMHQ13867 455 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 TRAM1Q15629 374 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 Q6P435 159 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 GLIPR1L1Q6UWM5 242 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 TMEM91Q6ZNR0 172 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 OSR2Q8N2R0 312 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 KIR3DL3Q8N743 410 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 OR4D6Q8NGJ1 314 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 OR5D13Q8NGL4 314 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 PPP1R35Q8TAP8 253 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 RHOFQ9HBH0 211 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 ST3GAL6Q9Y274 331 aa8.07□□□□□ -1.12
CALD1-223ENST00000496024 IGHV1-69DA0A0B4J2H0 117 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 A0A0G2JK05 382 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 A0A1W2PPH5 198 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 MEGF11A6BM72 1044 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 RNASEK-C17orf49H0YIS7 233 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 M0R1W7 72 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 SLC33A1O00400 549 aaPredicted RBP8.06□□□□□ -1.12
CALD1-223ENST00000496024 MGST3O14880 152 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 MRPS14O60783 128 aaKnown RBP8.06□□□□□ -1.12
CALD1-223ENST00000496024 SC5DO75845 299 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 IGHV1-69P01742 117 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 UCHL1P09936 223 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 SRMP19623 302 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 CALRP27797 417 aaKnown RBP8.06□□□□□ -1.12
CALD1-223ENST00000496024 GABRA5P31644 462 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 BMXP51813 675 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 AESQ08117 197 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 ATXN7L3Q14CW9 347 aaPredicted RBP8.06□□□□□ -1.12
CALD1-223ENST00000496024 NEDD8Q15843 81 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 SSX1Q16384 188 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 PAN3Q58A45 887 aaKnown RBP8.06□□□□□ -1.12
CALD1-223ENST00000496024 AWAT2Q6E213 333 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 ELP2Q6IA86 826 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 ZNF773Q6PK81 442 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 ASCL4Q6XD76 172 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 RBMS3Q6XE24 437 aaKnown RBP8.06□□□□□ -1.12
CALD1-223ENST00000496024 ZNF782Q6ZMW2 699 aaPredicted RBP8.06□□□□□ -1.12
CALD1-223ENST00000496024 TRAPPC6BQ86SZ2 158 aa8.06□□□□□ -1.12
CALD1-223ENST00000496024 LRRTM1Q86UE6 522 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms