RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	FAM58A	Q8N1B3	248 aa		13.91	□□□□□ -0.18
TMEM53-209	ENST00000495630	CHPT1	Q8WUD6	406 aa		13.91	□□□□□ -0.18
TMEM53-209	ENST00000495630	BORCS8	Q96FH0	119 aa		13.91	□□□□□ -0.18
TMEM53-209	ENST00000495630	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.91	□□□□□ -0.18
TMEM53-209	ENST00000495630	TRBV2	A0A0J9YWF9	115 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	C3orf84	H3BNL1	204 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	SH2D1B	O14796	132 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	SYT7	O43581	403 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	CYB5A	P00167	134 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	NPBWR2	P48146	333 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	CRISP1	P54107	249 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	GP2	P55259	537 aa	Known RBP	13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	HLA-DRB5	Q30154	266 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	SPIN3	Q5JUX0	258 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	PLEKHG7	Q6ZR37	379 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	DNAAF1	Q8NEP3	725 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	C10orf35	Q96D05	121 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	ASB9	Q96DX5	294 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	P2RX4	Q99571	388 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	ADI1	Q9BV57	179 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	CHST5	Q9GZS9	411 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	RBFOX1	Q9NWB1	397 aa	Known RBP	13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	CLN6	Q9NWW5	311 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	IL36RN	Q9UBH0	155 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	MOB4	Q9Y3A3	225 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630	HSPE1-MOB4	S4R3N1	261 aa		13.9	□□□□□ -0.18
TMEM53-209	ENST00000495630		A0A087X0M5	115 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630		A0A1B0GX30	115 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A18P	A6NE21	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A16P	A6NEW6	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A20P	A6NIJ5	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A9P	A6NNJ1	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A12P	A8MX19	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A5P	A8MXJ8	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630		H0YHG0	523 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	ENTPD6	O75354	484 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A15P	P0C7V4	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A13P	P0C7W8	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A14P	P0C7W9	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM90A24P	P0C7X0	464 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	OR3A4P	P47883	348 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	RBP2	P50120	134 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	ATP1B3	P54709	279 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	C8orf86	Q6ZUL3	223 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	CATSPERD	Q86XM0	798 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	COMMD1	Q8N668	190 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	CANT1	Q8WVQ1	401 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	DNAJC9	Q8WXX5	260 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	TFAP2C	Q92754	450 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	NSL1	Q96IY1	281 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	ZNF286A	Q9HBT8	521 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	ADGRL4	Q9HBW9	690 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	PCDHB16	Q9NRJ7	776 aa		13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	LSM4	Q9Y4Z0	139 aa	Known RBP	13.89	□□□□□ -0.19
TMEM53-209	ENST00000495630	NUDT19	A8MXV4	375 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	PRKY	O43930	277 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	RPP14	O95059	124 aa	Known RBP	13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	PRKACA	P17612	351 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	BCL3	P20749	454 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	EFNB1	P98172	346 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	PTGES3	Q15185	160 aa	Known RBP	13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	ODF4	Q2M2E3	257 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	AADACL4	Q5VUY2	407 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	YIPF7	Q8N8F6	280 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	OR4D6	Q8NGJ1	314 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	PP6455	Q8WZ26	134 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	HMG20A	Q9NP66	347 aa		13.88	□□□□□ -0.19
TMEM53-209	ENST00000495630	AQP12B	A6NM10	295 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	KRT8	P05787	483 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	GDNF	P39905	211 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	GLIPR1	P48060	266 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	MTCP1	P56278	107 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	AES	Q08117	197 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	KLHL22	Q53GT1	634 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	NXNL2	Q5VZ03	156 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	C18orf65	Q6ZTR6	163 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	AQP12A	Q8IXF9	295 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	PRRG3	Q9BZD7	231 aa		13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	EXOSC4	Q9NPD3	245 aa	Known RBP	13.87	□□□□□ -0.19
TMEM53-209	ENST00000495630	FAM172BP	A6NC97	362 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	SERPINE3	A8MV23	424 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630		H3BSH0	61 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	SIRPB1	O00241	398 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	OR2H2	O95918	312 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	CALCB	P10092	127 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	PRKACB	P22694	351 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	PTGFR	P43088	359 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	SLC35B1	P78383	322 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	NKAPL	Q5M9Q1	402 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	ZNF695	Q8IW36	515 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	KLHL30-AS1	Q8NEE0	82 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	RPE	Q96AT9	228 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	NRBF2	Q96F24	287 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	NOL4L	Q96MY1	436 aa	Predicted RBP	13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	GSTK1	Q9Y2Q3	226 aa		13.86	□□□□□ -0.19
TMEM53-209	ENST00000495630	ODAM	A1E959	279 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	METTL15	A6NJ78	407 aa		13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	ZNF729	A6NN14	1252 aa	Predicted RBP	13.85	□□□□□ -0.19
TMEM53-209	ENST00000495630	CCL24	O00175	119 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms