RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 RFPL4BQ6ZWI9 263 aa13.91□□□□□ -0.18
CBX4-204ENST00000495122 NLRC3Q7RTR2 1065 aa13.91□□□□□ -0.18
CBX4-204ENST00000495122 LYG2Q86SG7 212 aa13.91□□□□□ -0.18
CBX4-204ENST00000495122 LHFPL1Q86WI0 220 aa13.91□□□□□ -0.18
CBX4-204ENST00000495122 C12orf45Q8N5I9 185 aaPredicted RBP13.91□□□□□ -0.18
CBX4-204ENST00000495122 TMEM185AQ8NFB2 350 aa13.91□□□□□ -0.18
CBX4-204ENST00000495122 HPSE2Q8WWQ2 592 aa13.91□□□□□ -0.18
CBX4-204ENST00000495122 SPACA1Q9HBV2 294 aa13.91□□□□□ -0.18
CBX4-204ENST00000495122 ST3GAL6Q9Y274 331 aa13.91□□□□□ -0.18
CBX4-204ENST00000495122 A0A0B4J2A0 478 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 TRAPPC2LH3BP13 241 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 CCL2P13500 99 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 FUT3P21217 361 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 PPP1CBP62140 327 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 IFITM2Q01629 132 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 SRSF4Q08170 494 aaKnown RBP13.9□□□□□ -0.18
CBX4-204ENST00000495122 IL24Q13007 206 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 IL13RA2Q14627 380 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 NKPD1Q17RQ9 610 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 CHRFAM7AQ494W8 412 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 Q6ZS49 121 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 SLC25A26Q70HW3 274 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 PEG10Q86TG7 708 aaKnown RBP13.9□□□□□ -0.18
CBX4-204ENST00000495122 Q8IYB0 196 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 FBXL14Q8N1E6 418 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 MUC20Q8N307 709 aaPredicted RBP13.9□□□□□ -0.18
CBX4-204ENST00000495122 GTF3AQ92664 365 aaKnown RBP13.9□□□□□ -0.18
CBX4-204ENST00000495122 MICU1Q9BPX6 476 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 TMEM246Q9BRR3 403 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 RTL8AQ9BWD3 113 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 SFXN3Q9BWM7 321 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 PPA2Q9H2U2 334 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 SHPKQ9UHJ6 478 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 VSIG4Q9Y279 399 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 AKAP6Q13023 2319 aa13.9□□□□□ -0.18
CBX4-204ENST00000495122 IQCF6A8MYZ5 107 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 ZNF732B4DXR9 585 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 LYZL6O75951 148 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 IGLV1-44P01699 117 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 PMP2P02689 132 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 ZBTB25P24278 435 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 TSPAN5P62079 268 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 HLXQ14774 488 aaPredicted RBP13.89□□□□□ -0.19
CBX4-204ENST00000495122 TAF9Q16594 264 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 SIGIRRQ6IA17 410 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 VWA1Q6PCB0 445 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 SEM1Q6ZVN7 128 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 OVCH2Q7RTZ1 564 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 C6orf201Q7Z4U5 140 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 CALHM1Q8IU99 346 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 C9orf62Q8N4C0 152 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 OR2T35Q8NGX2 323 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 STARD4Q96DR4 205 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 MS4A3Q96HJ5 214 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 USB1Q9BQ65 265 aaKnown RBP13.89□□□□□ -0.19
CBX4-204ENST00000495122 CMSS1Q9BQ75 279 aaKnown RBP13.89□□□□□ -0.19
CBX4-204ENST00000495122 BCL2L14Q9BZR8 327 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 MGAT4AQ9UM21 535 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 GPR132Q9UNW8 380 aa13.89□□□□□ -0.19
CBX4-204ENST00000495122 PRRC2AP48634 2157 aaKnown RBP13.88□□□□□ -0.19
CBX4-204ENST00000495122 TMEM210A6NLX4 147 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 OR2AT4A6NND4 320 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 F5H5P2 479 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 J3QT63 122 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 DUS4LO95620 317 aaKnown RBP13.88□□□□□ -0.19
CBX4-204ENST00000495122 SFTPBP07988 381 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 ACAA1P09110 424 aaPredicted RBP13.88□□□□□ -0.19
CBX4-204ENST00000495122 HAAOP46952 286 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 IDH3GP51553 393 aaPredicted RBP13.88□□□□□ -0.19
CBX4-204ENST00000495122 UCP2P55851 309 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 DHRS2Q13268 280 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 TESK1Q15569 626 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 TMEM128Q5BJH2 165 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 NKAPLQ5M9Q1 402 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 LIN54Q6MZP7 749 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 C11orf88Q6PI97 169 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 ZNF767PQ75MW2 155 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 BHLHA15Q7RTS1 189 aaPredicted RBP13.88□□□□□ -0.19
CBX4-204ENST00000495122 SSX8Q7RTT4 187 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 TMED4Q7Z7H5 227 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 WDR31Q8NA23 367 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 RELL2Q8NC24 303 aaPredicted RBP13.88□□□□□ -0.19
CBX4-204ENST00000495122 OR10AD1Q8NGE0 317 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 MITD1Q8WV92 249 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 PHB2Q99623 299 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 RIMS4Q9H426 269 aaPredicted RBP13.88□□□□□ -0.19
CBX4-204ENST00000495122 IFT22Q9H7X7 185 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 C12orf4Q9NQ89 552 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 PIPOXQ9P0Z9 390 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 RCC2Q9P258 522 aaKnown RBP13.88□□□□□ -0.19
CBX4-204ENST00000495122 ANXA10Q9UJ72 324 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 RTTNQ86VV8 2226 aa13.88□□□□□ -0.19
CBX4-204ENST00000495122 LRP5LA4QPB2 252 aa13.87□□□□□ -0.19
CBX4-204ENST00000495122 OR5H1A6NKK0 313 aa13.87□□□□□ -0.19
CBX4-204ENST00000495122 GEMIN2O14893 280 aaKnown RBP13.87□□□□□ -0.19
CBX4-204ENST00000495122 HLA-AP01891 365 aaKnown RBP13.87□□□□□ -0.19
CBX4-204ENST00000495122 CSN2P05814 226 aa13.87□□□□□ -0.19
CBX4-204ENST00000495122 FCGR3AP08637 254 aa13.87□□□□□ -0.19
CBX4-204ENST00000495122 CD34P28906 385 aa13.87□□□□□ -0.19
CBX4-204ENST00000495122 CEACAM8P31997 349 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms