RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PRKACAP17612 351 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 OR3A4PP47883 348 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 ATP1B3P54709 279 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 UBE2V2Q15819 145 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 HLA-DRB5Q30154 266 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 BAIAP2L2Q6UXY1 529 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 TMEM179BQ7Z7N9 219 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 FAM58AQ8N1B3 248 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 YIPF7Q8N8F6 280 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 MED4Q9NPJ6 270 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 TAS2R3Q9NYW6 316 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 IL36RNQ9UBH0 155 aa11.3□□□□□ -0.6
VARS-228ENST00000495010 B2RBV5 119 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 SH2D1BO14796 132 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 DCTN3O75935 186 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 IGLV1-47P01700 117 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 KRT8P05787 483 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 CALCBP10092 127 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 BCL3P20749 454 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 CCL1P22362 96 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 PRKACGP22612 351 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 OR3A1P47881 315 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 POU3F4P49335 361 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 CDC42P60953 191 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 MS4A2Q01362 244 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 HES1Q14469 280 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 ZNF146Q15072 292 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 SPIN3Q5JUX0 258 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 Q6ZSR3 168 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 C18orf65Q6ZTR6 163 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 MEPCEQ7L2J0 689 aaKnown RBP11.29□□□□□ -0.6
VARS-228ENST00000495010 COMMD1Q8N668 190 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 RPEQ96AT9 228 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 PRRG3Q9BZD7 231 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 ZNF286AQ9HBT8 521 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 EXOSC4Q9NPD3 245 aaKnown RBP11.29□□□□□ -0.6
VARS-228ENST00000495010 PCDHB16Q9NRJ7 776 aa11.29□□□□□ -0.6
VARS-228ENST00000495010 RBFOX1Q9NWB1 397 aaKnown RBP11.29□□□□□ -0.6
VARS-228ENST00000495010 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 CD34P28906 385 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 PTGFRP43088 359 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 NPBWR2P48146 333 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 RBP2P50120 134 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 ZNF695Q8IW36 515 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 FOXRED2Q8IWF2 684 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 CCDC54Q8NEL0 328 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 CORO2AQ92828 525 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 TOMM40LQ969M1 308 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 NOL4LQ96MY1 436 aaPredicted RBP11.28□□□□□ -0.6
VARS-228ENST00000495010 P2RX4Q99571 388 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 ASCL2Q99929 193 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 CHST5Q9GZS9 411 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 CLN6Q9NWW5 311 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 ING3Q9NXR8 418 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 MRM2Q9UI43 246 aaKnown RBP11.28□□□□□ -0.6
VARS-228ENST00000495010 GSTK1Q9Y2Q3 226 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 ARL2BPQ9Y2Y0 163 aa11.28□□□□□ -0.6
VARS-228ENST00000495010 AMMECR1Q9Y4X0 333 aaPredicted RBP11.28□□□□□ -0.6
VARS-228ENST00000495010 ENTPD6O75354 484 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 SNRNP70P08621 437 aaKnown RBP11.27□□□□□ -0.61
VARS-228ENST00000495010 OCM2P0CE71 109 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 OCMP0CE72 109 aaPredicted RBP11.27□□□□□ -0.61
VARS-228ENST00000495010 TMEM11P17152 192 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 NFYBP25208 207 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 GLIPR1P48060 266 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 CRISP1P54107 249 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 MTCP1P56278 107 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 SCN1BQ07699 218 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 AESQ08117 197 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 C9orf66Q5T8R8 295 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 THNSL2Q86YJ6 484 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 HS3ST5Q8IZT8 346 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 OR5M8Q8NGP6 311 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 CCDC124Q96CT7 223 aaKnown RBP11.27□□□□□ -0.61
VARS-228ENST00000495010 HRASLS5Q96KN8 279 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 PRR25Q96S07 402 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 LINC00527Q9UJ94 153 aa11.27□□□□□ -0.61
VARS-228ENST00000495010 LSM4Q9Y4Z0 139 aaKnown RBP11.27□□□□□ -0.61
VARS-228ENST00000495010 LY6LH3BQJ8 138 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 CCL24O00175 119 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 PRKYO43930 277 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 OR2H2O95918 312 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 ZNF44P15621 663 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 HOXB6P17509 224 aaKnown RBP11.26□□□□□ -0.61
VARS-228ENST00000495010 GDNFP39905 211 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 ECI1P42126 302 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 BNIP1Q12981 228 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 KRBOX4Q5JUW0 171 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 BCDIN3DQ7Z5W3 292 aaKnown RBP11.26□□□□□ -0.61
VARS-228ENST00000495010 SLC35E3Q7Z769 313 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 CATSPERDQ86XM0 798 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 ADGRG5Q8IZF4 528 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 DNAAF1Q8NEP3 725 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 OR56B4Q8NH76 319 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 OR9G1Q8NH87 305 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 DNAJC9Q8WXX5 260 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 PP6455Q8WZ26 134 aa11.26□□□□□ -0.61
VARS-228ENST00000495010 C10orf35Q96D05 121 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms