RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SNU13P55769 128 aaKnown RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 TAS2R46P59540 309 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 UBE2MP61081 183 aaKnown RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 LY6DQ14210 128 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 OR8G1Q15617 311 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 RNASE10Q5GAN6 216 aaKnown RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 ATPAF1Q5TC12 328 aaPredicted RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 METTL11BQ5VVY1 283 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 ZNF626Q68DY1 528 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 OR52W1Q6IF63 320 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 WDR82Q6UXN9 313 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 ZNF782Q6ZMW2 699 aaPredicted RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 IDO2Q6ZQW0 420 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 SLC25A42Q86VD7 318 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 DMRTC2Q8IXT2 367 aaPredicted RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 BPIFB2Q8N4F0 458 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 BEST4Q8NFU0 473 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 OR8S1Q8NH09 359 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 OR4K15Q8NH41 348 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 FAM222BQ8WU58 562 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 GIMAP1Q8WWP7 306 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 ERGIC1Q969X5 290 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 SLAMF9Q96A28 289 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 RADILQ96JH8 1075 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 OR2A7Q96R45 310 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 TMEM204Q9BSN7 226 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 MRPL37Q9BZE1 423 aaKnown RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 OR51B6Q9H340 312 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 OR51J1Q9H342 316 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 FN3KRPQ9HA64 309 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 ELL3Q9HB65 397 aaPredicted RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 ANXA10Q9UJ72 324 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 GPR132Q9UNW8 380 aa5.74□□□□□ -1.49
MSH5-217ENST00000494458 RP1L1Q8IWN7 2480 aaPredicted RBP5.74□□□□□ -1.49
MSH5-217ENST00000494458 ATRXP46100 2492 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 CADP27708 2225 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 TRAV6A0A075B6T7 132 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ZSCAN5BA6NJL1 495 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 SRRM5B3KS81 715 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 SHISA9B4DS77 424 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 NPIPB11E5RHQ5 1161 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ATP6V1G2-DDX39BF2Z307 99 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 F5H5P2 479 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 M0QYG6 137 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 CCL21O00585 134 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ARPC1BO15143 372 aaKnown RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 CCNKO75909 580 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 AMY2AP04746 511 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ZBTB25P24278 435 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ECI1P42126 302 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 KCNJ3P48549 501 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 UCP3P55916 312 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 KLF3P57682 345 aaPredicted RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 RAB25P57735 213 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 BSPH1Q075Z2 132 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 SRSF4Q08170 494 aaKnown RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 ARFRP1Q13795 201 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 CDSNQ15517 529 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 MPPED2Q15777 294 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ADIPOQQ15848 244 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 IGFBP7Q16270 282 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 CR1LQ2VPA4 569 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 AKAP14Q86UN6 197 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ZNF808Q8N4W9 903 aaPredicted RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 GALNT11Q8NCW6 608 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 DIRC2Q96SL1 478 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 CMSS1Q9BQ75 279 aaKnown RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 GINS4Q9BRT9 223 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 HDHD3Q9BSH5 251 aaPredicted RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 TOLLIPQ9H0E2 274 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 LIME1Q9H400 295 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 NCOR1P1Q9H4R4 102 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 MSL2Q9HCI7 577 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 Q9N2K0 584 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 NGBQ9NPG2 151 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 C12orf4Q9NQ89 552 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 IFT46Q9NQC8 304 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 CA10Q9NS85 328 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 MBNL3Q9NUK0 354 aaKnown RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 NKIRAS2Q9NYR9 191 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 IL36RNQ9UBH0 155 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 IL19Q9UHD0 177 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 ZNF230Q9UIE0 474 aaPredicted RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 ERRFI1Q9UJM3 462 aaPredicted RBP5.73□□□□□ -1.49
MSH5-217ENST00000494458 ZDHHC8Q9ULC8 765 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 VSIG4Q9Y279 399 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 WIPI2Q9Y4P8 454 aa5.73□□□□□ -1.49
MSH5-217ENST00000494458 MEIKINA0A087WXM9 373 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 A0A0B4J2A0 478 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 TMEM82A0PJX8 343 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 DBX1A6NMT0 343 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 MCRIP1C9JLW8 97 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 SLC33A1O00400 549 aaPredicted RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 TNFRSF13BO14836 293 aaPredicted RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 SIAH2O43255 324 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 TIMM8AO60220 97 aaPredicted RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 TUSC2O75896 110 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 OR7C1O76099 320 aaPredicted RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 FSTL3O95633 263 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms