RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 EDF1O60869 148 aaKnown RBP4.16□□□□□ -1.74
PTCD3-219ENST00000494323 PTBP3O95758 552 aaKnown RBP4.16□□□□□ -1.74
PTCD3-219ENST00000494323 TXNDC12O95881 172 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 RENP00797 406 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 SERPINA1P01009 418 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 H1F0P07305 194 aaKnown RBP4.16□□□□□ -1.74
PTCD3-219ENST00000494323 TROVE2P10155 538 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTCD3-219ENST00000494323 PYCR1P32322 319 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 SAA4P35542 130 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 OMPP47874 163 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 RAB13P51153 203 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 ISL1P61371 349 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 CSNK2BP67870 215 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 LIPEQ05469 1076 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 SCN1BQ07699 218 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 PCK2Q16822 640 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 MICBQ29980 383 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 RFX4Q33E94 735 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 NSUN5P1Q3KNT7 163 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 SLC36A3Q495N2 470 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 DEFB121Q5J5C9 76 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 FGD3Q5JSP0 725 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 WDR38Q5JTN6 314 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 TEX36Q5VZQ5 186 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 PLBD1Q6P4A8 553 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 DNM1P34Q6PK57 102 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 SMARCD3Q6STE5 483 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 WDR86Q86TI4 376 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 ADCK1Q86TW2 530 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 CYP4Z1Q86W10 505 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 LINC00471Q8N535 108 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 OR56B2PQ8NGI1 322 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 OR51L1Q8NGJ5 315 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 OR9Q1Q8NGQ5 310 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 OR8S1Q8NH09 359 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 NPRL2Q8WTW4 380 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 ZNRF4Q8WWF5 429 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 TNFRSF14Q92956 283 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF799Q96GE5 643 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 GPX7Q96SL4 187 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-219ENST00000494323 SSX3Q99909 188 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 NDEL1Q9GZM8 345 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 SLC22A4Q9H015 551 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 CSTL1Q9H114 145 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 WDR13Q9H1Z4 485 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 SAR1AQ9NR31 198 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 CENPMQ9NSP4 180 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 GID8Q9NWU2 228 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 MRPL22Q9NWU5 206 aaKnown RBP4.16□□□□□ -1.74
PTCD3-219ENST00000494323 KAAG1Q9UBP8 84 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF391Q9UJN7 358 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 RNF150Q9ULK6 438 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 KCNK7Q9Y2U2 307 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 CAB39Q9Y376 341 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-219ENST00000494323 FAM32AQ9Y421 112 aaKnown RBP4.16□□□□□ -1.74
PTCD3-219ENST00000494323 KPTNQ9Y664 436 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 ENPP4Q9Y6X5 453 aa4.16□□□□□ -1.74
PTCD3-219ENST00000494323 TEX13DA0A0J9YY54 714 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 MAGEA13PA6NCF6 341 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 ANKRD30BLA7E2S9 258 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF593O00488 134 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 AKR7A2O43488 359 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 FAM106CPP0CH98 169 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 CD28P10747 220 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 PSKH1P11801 424 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 MUC1P15941 1255 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF823P16415 610 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 KIR2DS4P43632 304 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 TGM4P49221 684 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 UBE2E1P51965 193 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 EFNB2P52799 333 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 DGCR6Q14129 220 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 TAF13Q15543 124 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 ZNF674Q2M3X9 581 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 LBHQ53QV2 105 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 LRRC10Q5BKY1 277 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 COQ5Q5HYK3 327 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 VAX1Q5SQQ9 334 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 METAP1DQ6UB28 335 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 WDR82Q6UXN9 313 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 SLC36A1Q7Z2H8 476 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 DPY19L4Q7Z388 723 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 DCXRQ7Z4W1 244 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 SATL1Q86VE3 508 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 KLHDC1Q8N7A1 406 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 SPERTQ8NA61 448 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 CYB561A3Q8NBI2 242 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 SDR9C7Q8NEX9 313 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 OR1M1Q8NGA1 313 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 NUDCD2Q8WVJ2 157 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 SPTSSAQ969W0 71 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 PHF21AQ96BD5 680 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 SGK3Q96BR1 496 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 RCN3Q96D15 328 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 DUS3LQ96G46 650 aaKnown RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 OR5M11Q96RB7 305 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 FEVQ99581 238 aa4.15□□□□□ -1.75
PTCD3-219ENST00000494323 NKX3-1Q99801 234 aaPredicted RBP4.15□□□□□ -1.75
PTCD3-219ENST00000494323 BTBD10Q9BSF8 475 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms