RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	EMG1	Q92979	244 aa	Known RBP	6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	SLAMF9	Q96A28	289 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	FOXRED1	Q96CU9	486 aa	Predicted RBP	6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	MALSU1	Q96EH3	234 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	ZNF714	Q96N38	554 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	RIBC2	Q9H4K1	309 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	IMPAD1	Q9NX62	359 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	GNG8	Q9UK08	70 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	FOXJ3	Q9UPW0	622 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	PCDHGB5	Q9Y5G0	923 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	ORC6	Q9Y5N6	252 aa		6.11	□□□□□ -1.43
RBM39-238	ENST00000493853	MEX3A	A1L020	520 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	C17orf98	A8MV24	154 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	APOL3	O95236	402 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	UBC	P0CG48	685 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	ZNF20	P17024	532 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	CCL1	P22362	96 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	PRKACB	P22694	351 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	RBP2	P50120	134 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	RAB13	P51153	203 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	EFNB2	P52799	333 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	MTCP1	P56278	107 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	ERVK11-1	P61568	191 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	EFNB1	P98172	346 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	EMX1	Q04741	257 aa	Predicted RBP	6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	MEF2C	Q06413	473 aa	Predicted RBP	6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	SLC34A1	Q06495	639 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	TMED1	Q13445	227 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	UBE2V2	Q15819	145 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	GRK1	Q15835	563 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	NSUN5P1	Q3KNT7	163 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	TMEM244	Q5VVB8	128 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	SLC25A26	Q70HW3	274 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	SSX6	Q7RTT6	188 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	KCTD20	Q7Z5Y7	419 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	LHFPL4	Q7Z7J7	247 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	ZNF676	Q8N7Q3	588 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	CAPSL	Q8WWF8	208 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	PP6455	Q8WZ26	134 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	C10orf35	Q96D05	121 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	MRPL48	Q96GC5	212 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	SNX22	Q96L94	193 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	MYCBP	Q99417	103 aa	Predicted RBP	6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	CIB1	Q99828	191 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	CDCA4	Q9BXL8	241 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	PRSS22	Q9GZN4	317 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	NEK6	Q9HC98	313 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	HES4	Q9HCC6	221 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	MTCH1	Q9NZJ7	389 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	TBL2	Q9Y4P3	447 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-238	ENST00000493853	PKD1L1	Q8TDX9	2849 aa		6.1	□□□□□ -1.43
RBM39-238	ENST00000493853		A0A0G2JK05	382 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	LOC107986453	A0A1B0GWG9	222 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	DAPL1	A0PJW8	107 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	FUOM	A2VDF0	154 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	SNTN	A6NMZ2	147 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	VGLL3	A8MV65	326 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	ZNF561-AS1	K7EIQ3	104 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	F2RL2	O00254	374 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	SH2D1B	O14796	132 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	XPNPEP2	O43895	674 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	HAND1	O96004	215 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	RBP4	P02753	201 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OPN1MW	P04001	364 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	AMY2A	P04746	511 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OPN1MW2	P0DN77	364 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OPN1MW3	P0DN78	364 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	IGHV1-8	P0DP01	117 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	PRKACA	P17612	351 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	POU3F4	P49335	361 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	ARHGDIB	P52566	201 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	SNU13	P55769	128 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	ACTA2	P62736	377 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	ACTG2	P63267	376 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	ACTC1	P68032	377 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	ACTA1	P68133	377 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	BNIP1	Q12981	228 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	KPNB1	Q14974	876 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	TP53I3	Q53FA7	332 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OR52W1	Q6IF63	320 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	ZBTB49	Q6ZSB9	765 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853		Q6ZSR3	168 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	TMEM219	Q86XT9	240 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	RDH10	Q8IZV5	341 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OR8H2	Q8N162	312 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	FAM58A	Q8N1B3	248 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	C11orf42	Q8N5U0	333 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OR4S1	Q8NGB4	309 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OR11H6	Q8NGC7	330 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	TRUB1	Q8WWH5	349 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	STMN2	Q93045	179 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	FGGY	Q96C11	551 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	CENPN	Q96H22	339 aa	Predicted RBP	6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	AJUBA	Q96IF1	538 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OR5M11	Q96RB7	305 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OSBPL10	Q9BXB5	764 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	CHST5	Q9GZS9	411 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	GABARAPL1	Q9H0R8	117 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	OAZ3	Q9UMX2	235 aa		6.09	□□□□□ -1.43
RBM39-238	ENST00000493853	HILPDA	Q9Y5L2	63 aa		6.09	□□□□□ -1.43

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