RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MRPS11P82912 194 aaKnown RBP7□□□□□ -1.29
BRCA1-221ENST00000493795 PDCD1Q15116 288 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 WFDC3Q8IUB2 231 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 FAM169BQ8N8A8 192 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 MRGPRDQ8TDS7 321 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 CDX2Q99626 313 aaPredicted RBP7□□□□□ -1.29
BRCA1-221ENST00000493795 NEURL2Q9BR09 285 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 CYSLTR2Q9NS75 346 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 MIOXQ9UGB7 285 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 FZR1Q9UM11 496 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 LNP1A1A4G5 178 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 NPBWR2P48146 333 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM33P57088 247 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 SPATA45Q537H7 98 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM211Q6ICI0 200 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM108Q6UXF1 575 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 ETFBKMTQ8IXQ9 262 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 STPG2Q8N412 459 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 OR5M9Q8NGP3 310 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 ZNF707Q96C28 371 aaPredicted RBP7□□□□□ -1.29
BRCA1-221ENST00000493795 EXOGQ9Y2C4 368 aaKnown RBP7□□□□□ -1.29
BRCA1-221ENST00000493795 MYH10P35580 1976 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 PDCD6O75340 191 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 WNT1P04628 370 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 SCAND1P57086 179 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM255AQ5JRV8 349 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 MEIG1Q5JSS6 88 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 RNFT1Q5M7Z0 435 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 SLC35E3Q7Z769 313 aa7□□□□□ -1.29
BRCA1-221ENST00000493795 LILRA3Q8N6C8 439 aaPredicted RBP7□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM189A5PLL7 270 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 HMSDA8MTL9 139 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 RAG2P55895 527 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 CTF1Q16619 201 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 LRRC75BQ2VPJ9 315 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 GCSAMLQ5JQS6 135 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 EBLN2Q6P2I7 272 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 TBC1D29Q9UFV1 150 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 IGKV3-7A0A075B6H7 116 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 TRAV38-1A0A0B4J264 116 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 CAPZBP47756 277 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 HINT1P49773 126 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-221ENST00000493795 HES3Q5TGS1 186 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 OTPQ5XKR4 325 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 FAHD1Q6P587 224 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 ZNF880Q6PDB4 577 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 OR2V2Q96R30 315 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 PRNDQ9UKY0 176 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 TMSB15BA0A087X1C1 80 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 LINC01553A4QN01 128 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 H3BMH7 237 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 CTSDP07339 412 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-221ENST00000493795 SLC25A1P53007 311 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 DMRTC1Q5HYR2 192 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 PARM1Q6UWI2 310 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM179BQ7Z7N9 219 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 PRNTQ86SH4 94 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 FIZ1Q96SL8 496 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 MTFP1Q9UDX5 166 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 FAM90A27PA6NNH2 459 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 LGALSLQ3ZCW2 172 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-221ENST00000493795 MORN1Q5T089 497 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 OIT3Q8WWZ8 545 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM70Q9BUB7 260 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 WDR13Q9H1Z4 485 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 FAM206AQ9NX38 181 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 MMP17Q9ULZ9 603 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 CCL26Q9Y258 94 aa6.99□□□□□ -1.29
BRCA1-221ENST00000493795 FAM181BA6NEQ2 426 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 FCMRO60667 390 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 MPDU1O75352 247 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 KBTBD11O94819 623 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 EPPINO95925 133 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 SBK3P0C264 359 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 AGERQ15109 404 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 TCTN3Q6NUS6 607 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 FAHD2BQ6P2I3 314 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-221ENST00000493795 MRGPRGQ86SM5 289 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 FAM222BQ8WU58 562 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 ISOC2Q96AB3 205 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 C6orf106Q9H6K1 298 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-221ENST00000493795 FGF22Q9HCT0 170 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 PGPEP1Q9NXJ5 209 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 HIGD1AQ9Y241 93 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 DNAJC25-GNG10A0A024R161 153 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.98□□□□□ -1.29
BRCA1-221ENST00000493795 TRAV17A0A0B4J275 112 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 UPK1AO00322 258 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 PAGE4O60829 102 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 SS18L1O75177 396 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-221ENST00000493795 POLR2GP62487 172 aaKnown RBP eCLIP6.98□□□□□ -1.29
BRCA1-221ENST00000493795 ASCL5Q7RTU5 278 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 LDLRAD3Q86YD5 345 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 PDLIM7Q9NR12 457 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 CHD1O14646 1710 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 TCRBV5S2A0A599 114 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 ZNF735P0CB33 412 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 FAM3BP58499 235 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-221ENST00000493795 C16orf82Q7Z2V1 217 aa6.98□□□□□ -1.29
BRCA1-221ENST00000493795 MRPL30Q8TCC3 161 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms