RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ZG16BQ96DA0 208 aa17.8■□□□□ 0.44
RNF40-203ENST00000493683 PLAC1Q9HBJ0 212 aa17.8■□□□□ 0.44
RNF40-203ENST00000493683 ZNF716A6NP11 495 aa17.8■□□□□ 0.44
RNF40-203ENST00000493683 PDE6DO43924 150 aa17.8■□□□□ 0.44
RNF40-203ENST00000493683 UBE2L3P68036 154 aaKnown RBP17.8■□□□□ 0.44
RNF40-203ENST00000493683 MPV17LQ2QL34 196 aa17.8■□□□□ 0.44
RNF40-203ENST00000493683 RHBDD2Q6NTF9 364 aa17.8■□□□□ 0.44
RNF40-203ENST00000493683 CXorf67Q86X51 503 aaPredicted RBP17.8■□□□□ 0.44
RNF40-203ENST00000493683 SPNS2Q8IVW8 549 aa17.8■□□□□ 0.44
RNF40-203ENST00000493683 MYO5AQ9Y4I1 1855 aaKnown RBP17.79■□□□□ 0.44
RNF40-203ENST00000493683 OR3A1P47881 315 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 ZNF345Q14585 488 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 ZNF260Q3ZCT1 412 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 OR6S1Q8NH40 331 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 ESRP2Q9H6T0 727 aaKnown RBP17.79■□□□□ 0.44
RNF40-203ENST00000493683 GPR27Q9NS67 375 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 PRSS50Q9UI38 385 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 PCDHGA9Q9Y5G4 932 aaKnown RBP17.79■□□□□ 0.44
RNF40-203ENST00000493683 C8orf82Q6P1X6 216 aaPredicted RBP17.79■□□□□ 0.44
RNF40-203ENST00000493683 C9orf62Q8N4C0 152 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 SMDT1Q9H4I9 107 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 HPXP02790 462 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 SKP2Q13309 424 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 IRF3Q14653 427 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 VASH2Q86V25 355 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 DOLPP1Q86YN1 238 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 MOGAT1Q96PD6 335 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 PARP11Q9NR21 331 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 OPN4Q9UHM6 478 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 ZNF83P51522 516 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 VWA1Q6PCB0 445 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 LRP11Q86VZ4 500 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 RAB24Q969Q5 203 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 SLC26A1Q9H2B4 701 aa17.79■□□□□ 0.44
RNF40-203ENST00000493683 LEUTXA8MZ59 168 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 BMPR1BO00238 502 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 POLR2GP62487 172 aaKnown RBP eCLIP17.78■□□□□ 0.44
RNF40-203ENST00000493683 PDCD1Q15116 288 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 PTP4A1Q93096 173 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 PTX4Q96A99 478 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 R3HDM4Q96D70 268 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 PERPQ96FX8 193 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 METAP1P53582 386 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 GABRG3Q99928 467 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 WDR13Q9H1Z4 485 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 DEFB108AA8MXU0 73 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 MT-CO3P00414 261 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 CD1AP06126 327 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 RPL29P47914 159 aaKnown RBP17.78■□□□□ 0.44
RNF40-203ENST00000493683 STXBP6Q8NFX7 210 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 OR10A7Q8NGE5 316 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 RFESDQ8TAC1 157 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 ZMAT5Q9UDW3 170 aaKnown RBP17.78■□□□□ 0.44
RNF40-203ENST00000493683 CES1P1Q9UKY3 287 aa17.78■□□□□ 0.44
RNF40-203ENST00000493683 IGSF23A1L1A6 192 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 K7ESF4 209 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 MFNGO00587 321 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 PGA4P0DJD7 388 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 PGA5P0DJD9 388 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 MESTQ5EB52 335 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 MRGPRGQ86SM5 289 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 GVQW1Q8N7I0 195 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 OR5M9Q8NGP3 310 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 NEU3Q9UQ49 428 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 TRAV38-1A0A0B4J264 116 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 A0A1B0GTH9 108 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 LIPT2A6NK58 231 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 K7EQS6 105 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 LINC01565O15544 149 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 CTGFP29279 349 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 SULT1A1P50225 295 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 OR52L2PQ8NGH6 319 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 RP1L1Q8IWN7 2480 aaPredicted RBP17.77■□□□□ 0.44
RNF40-203ENST00000493683 TRBV5-3A0A0A0MS03 114 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 C11orf94C9JXX5 98 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 NXPH1P58417 271 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 RIGQ13278 110 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 GUSBP11Q6P575 273 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 HSD17B10Q99714 261 aaKnown RBP17.77■□□□□ 0.44
RNF40-203ENST00000493683 NUDT16L1Q9BRJ7 211 aaKnown RBP17.77■□□□□ 0.44
RNF40-203ENST00000493683 FRRS1LQ9P0K9 344 aa17.77■□□□□ 0.44
RNF40-203ENST00000493683 GZMHP20718 246 aa17.77■□□□□ 0.43
RNF40-203ENST00000493683 MRPS11P82912 194 aaKnown RBP17.77■□□□□ 0.43
RNF40-203ENST00000493683 MRPS18AQ9NVS2 196 aaKnown RBP17.77■□□□□ 0.43
RNF40-203ENST00000493683 M0R2Z0 102 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 SEC11BP0C7V7 166 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 HERVK_113P61574 105 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 LSM11P83369 360 aaKnown RBP eCLIP17.76■□□□□ 0.43
RNF40-203ENST00000493683 KLF9Q13886 244 aaPredicted RBP17.76■□□□□ 0.43
RNF40-203ENST00000493683 HLA-DRB5Q30154 266 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.76■□□□□ 0.43
RNF40-203ENST00000493683 FAM219AQ8IW50 185 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 KCNK15Q9H427 330 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 LIPGQ9Y5X9 500 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 A0A1B0GU03 582 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 SEMA7AO75326 666 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 ADAP1O75689 374 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 SEZ6L2Q6UXD5 910 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 MRGPRDQ8TDS7 321 aa17.76■□□□□ 0.43
RNF40-203ENST00000493683 VSTM2LQ96N03 204 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms