RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CADM1Q9BY67 442 aaKnown RBP8.72□□□□□ -1.01
SNRNP200-207ENST00000493271 CHST5Q9GZS9 411 aa8.72□□□□□ -1.01
SNRNP200-207ENST00000493271 KRT84Q9NSB2 600 aa8.72□□□□□ -1.01
SNRNP200-207ENST00000493271 AMMECR1Q9Y4X0 333 aaPredicted RBP8.72□□□□□ -1.01
SNRNP200-207ENST00000493271 LSM4Q9Y4Z0 139 aaKnown RBP8.72□□□□□ -1.01
SNRNP200-207ENST00000493271 FAM90A18PA6NE21 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A16PA6NEW6 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 CCDC182A6NF36 153 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A20PA6NIJ5 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A9PA6NNJ1 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A12PA8MX19 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A5PA8MXJ8 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 F8VVB4 439 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 F8VWA3 439 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 PSPNO60542 156 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 IGHA1P01876 353 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A15PP0C7V4 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A13PP0C7W8 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A14PP0C7W9 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM90A24PP0C7X0 464 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 CDK2P24941 298 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 CD24P25063 80 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 PTGFRP43088 359 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 RBP2P50120 134 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 CXCR4P61073 352 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 KPNB1Q14974 876 aaKnown RBP8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 C9orf66Q5T8R8 295 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 C8orf86Q6ZUL3 223 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 SLC25A26Q70HW3 274 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 ZNF695Q8IW36 515 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FOXRED2Q8IWF2 684 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 FAM58AQ8N1B3 248 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 KLHL30-AS1Q8NEE0 82 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 OR4D6Q8NGJ1 314 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 PP6455Q8WZ26 134 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 LRGUKQ96M69 825 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 ADI1Q9BV57 179 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 GON7Q9BXV9 100 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 CHST6Q9GZX3 395 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 RHOFQ9HBH0 211 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 CLN6Q9NWW5 311 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 COPS3Q9UNS2 423 aa8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 SIRT4Q9Y6E7 314 aaPredicted RBP8.71□□□□□ -1.02
SNRNP200-207ENST00000493271 RYR2Q92736 4967 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 ZNF729A6NN14 1252 aaPredicted RBP8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 PRR32B1ATL7 298 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 ZNF670-ZNF695F2Z2N8 137 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 LY6LH3BQJ8 138 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 SH2D1BO14796 132 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 SYT7O43581 403 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 MMP23AO75900 390 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 CSN2P05814 226 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 CCDC159P0C7I6 412 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 CHATP28329 748 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 OR3A1P47881 315 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 ATP1B3P54709 279 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 DOC2BQ14184 412 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 UBE2V2Q15819 145 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 PRAMEF5Q5TYX0 476 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 ZNF329Q86UD4 541 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 SLC35F2Q8IXU6 374 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 Q8NFD4 153 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 OR5M8Q8NGP6 311 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 OR8U1Q8NH10 309 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 OR9G1Q8NH87 305 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 TFAP2CQ92754 450 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 RPEQ96AT9 228 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 ASB9Q96DX5 294 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 APOL4Q9BPW4 351 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 EXOSC4Q9NPD3 245 aaKnown RBP8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 ARL8BQ9NVJ2 186 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 TVP23BQ9NYZ1 205 aa8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 H2AFY2Q9P0M6 372 aaPredicted RBP8.7□□□□□ -1.02
SNRNP200-207ENST00000493271 IGKV1-27A0A075B6S5 117 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 A6NIN4 97 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 SERPINE3A8MV23 424 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 ENTPD6O75354 484 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 IGHG2P01859 326 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 KRT8P05787 483 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 RAB7AP51149 207 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 NXNL2Q5VZ03 156 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 TEX38Q6PEX7 206 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 MEPCEQ7L2J0 689 aaKnown RBP8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 SLC35E3Q7Z769 313 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 OR8H3Q8N146 312 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 C5orf56Q8N8D9 126 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 CHST4Q8NCG5 386 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 TOMM40LQ969M1 308 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 HRASLS5Q96KN8 279 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 TTTY10Q9BZA0 68 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 ZNF286AQ9HBT8 521 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 OR6C3Q9NZP0 311 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 MRM2Q9UI43 246 aaKnown RBP8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 STAB2Q8WWQ8 2551 aa8.69□□□□□ -1.02
SNRNP200-207ENST00000493271 ODAMA1E959 279 aa8.68□□□□□ -1.02
SNRNP200-207ENST00000493271 SH2D7A6NKC9 451 aaPredicted RBP8.68□□□□□ -1.02
SNRNP200-207ENST00000493271 CCL24O00175 119 aa8.68□□□□□ -1.02
SNRNP200-207ENST00000493271 OR2H2O95918 312 aa8.68□□□□□ -1.02
SNRNP200-207ENST00000493271 UBCP0CG48 685 aaKnown RBP8.68□□□□□ -1.02
SNRNP200-207ENST00000493271 PRKACAP17612 351 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms