RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 REC114Q7Z4M0 266 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 CHST4Q8NCG5 386 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 OR4F17Q8NGA8 305 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 OR52N4Q8NGI2 321 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 OR5D14Q8NGL3 314 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 NDNFQ8TB73 568 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 CAPSLQ8WWF8 208 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 ADAT3Q96EY9 351 aaPredicted RBP10.05□□□□□ -0.8
COL6A1-205ENST00000492851 OR4F4Q96R69 305 aa10.05□□□□□ -0.8
COL6A1-205ENST00000492851 RBFOX1Q9NWB1 397 aaKnown RBP10.05□□□□□ -0.8
COL6A1-205ENST00000492851 EXOGQ9Y2C4 368 aaKnown RBP10.05□□□□□ -0.8
COL6A1-205ENST00000492851 LEUTXA8MZ59 168 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 J3QLW9 94 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 PSPNO60542 156 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 KDM4BO94953 1096 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 FADS2O95864 444 aaKnown RBP10.04□□□□□ -0.8
COL6A1-205ENST00000492851 IGHA1P01876 353 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 DBTP11182 482 aaKnown RBP10.04□□□□□ -0.8
COL6A1-205ENST00000492851 ZNF19P17023 458 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 PAX6P26367 422 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 PRRX1P54821 245 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 PLA1AQ53H76 456 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 CCBE1Q6UXH8 406 aaPredicted RBP10.04□□□□□ -0.8
COL6A1-205ENST00000492851 HEPN1Q6WQI6 88 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 NDUFA11Q86Y39 141 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 SERPINA12Q8IW75 414 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 DYNAPQ8N1N2 210 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 SYS1Q8N2H4 156 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 ABHD12Q8N2K0 398 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 OR13C3Q8NGS6 347 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 STMN2Q93045 179 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 CHST6Q9GZX3 395 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 ZCCHC4Q9H5U6 513 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 ZNF702PQ9H963 129 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 INPP5EQ9NRR6 644 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 SERTAD4Q9NUC0 356 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 DPM3Q9P2X0 92 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 GSTK1Q9Y2Q3 226 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 HILPDAQ9Y5L2 63 aa10.04□□□□□ -0.8
COL6A1-205ENST00000492851 FAM90A22PA8MWA6 464 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 TOR1AO14656 332 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 MAGEB3O15480 346 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 CSN2P05814 226 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 CCDC159P0C7I6 412 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 DUSP1P28562 367 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 OR3A1P47881 315 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 BDH1Q02338 343 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 ALKBH1Q13686 389 aaKnown RBP10.03□□□□□ -0.8
COL6A1-205ENST00000492851 GALEQ14376 348 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 TCF23Q7RTU1 214 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 C11orf44Q8N8P7 122 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 ZNF565Q8N9K5 539 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 OR4D6Q8NGJ1 314 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 PYDC1Q8WXC3 89 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
COL6A1-205ENST00000492851 COMMD4Q9H0A8 199 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 GMPPBQ9Y5P6 360 aa10.03□□□□□ -0.8
COL6A1-205ENST00000492851 TMEM212A6NML5 194 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 OR4C45A6NMZ5 311 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 OOSP1A8MZH6 123 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 SIRPB1O00241 398 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 EI24O14681 340 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 DEGS1O15121 323 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 OR2H2O95918 312 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 HCKP08631 526 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 ZNF44P15621 663 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 VDAC2P45880 294 aaPredicted RBP10.02□□□□□ -0.81
COL6A1-205ENST00000492851 NANOS3P60323 173 aaKnown RBP10.02□□□□□ -0.81
COL6A1-205ENST00000492851 RAB40BQ12829 278 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 KLHL22Q53GT1 634 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 KPRPQ5T749 579 aaPredicted RBP10.02□□□□□ -0.81
COL6A1-205ENST00000492851 CCDC144NLQ6NUI1 221 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 TMEM219Q86XT9 240 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 C1QL4Q86Z23 238 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 TPRX1Q8N7U7 411 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 PELI1Q96FA3 418 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 C4orf36Q96KX1 117 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 C9orf16Q9BUW7 83 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 ALG8Q9BVK2 526 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 WNT10AQ9GZT5 417 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 LIN7BQ9HAP6 207 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 OR6C3Q9NZP0 311 aa10.02□□□□□ -0.81
COL6A1-205ENST00000492851 MEX3AA1L020 520 aaKnown RBP10.01□□□□□ -0.81
COL6A1-205ENST00000492851 ZNF729A6NN14 1252 aaPredicted RBP10.01□□□□□ -0.81
COL6A1-205ENST00000492851 E9PQ18 207 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 M0QZK8 103 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 SULT1B1O43704 296 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 TMEM225BP0DP42 221 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 CD28P10747 220 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 CDK2P24941 298 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 CD34P28906 385 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 MNDAP41218 407 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 PTGFRP43088 359 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 MTNR1BP49286 362 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 GBX2P52951 348 aaPredicted RBP10.01□□□□□ -0.81
COL6A1-205ENST00000492851 SNU13P55769 128 aaKnown RBP10.01□□□□□ -0.81
COL6A1-205ENST00000492851 BLCAPP62952 87 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 SCN1BQ07699 218 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 AESQ08117 197 aa10.01□□□□□ -0.81
COL6A1-205ENST00000492851 KISS1Q15726 138 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms