RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SGPP2Q8IWX5 399 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR8A1Q8NGG7 326 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR2K2Q8NGT1 345 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR1P1Q8NH06 330 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 PHF10Q8WUB8 498 aaKnown RBP1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 NELFBQ8WX92 580 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 CCDC124Q96CT7 223 aaKnown RBP1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 YPEL4Q96NS1 127 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 SUCNR1Q9BXA5 334 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 SRRQ9GZT4 340 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 METTL8Q9H825 291 aaKnown RBP1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 TREM1Q9NP99 234 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 INIPQ9NRY2 104 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 CHMP5Q9NZZ3 219 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 SLC22A14Q9Y267 594 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF706Q9Y5V0 76 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 USH1CQ9Y6N9 552 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF780BQ9Y6R6 833 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 NRCAMQ92823 1304 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 CACNA1DQ01668 2161 aa1.4□□□□□ -2.19
HMGB1P30-201ENST00000492455 NID2Q14112 1375 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZSWIM8A7E2V4 1837 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 MYBPHLA2RUH7 354 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 GMNCA6NCL1 334 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ERICH4A6NGS2 130 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGLL5B9A064 214 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 HSBP1L1C9JCN9 74 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 MYO1DO94832 1006 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 BRI3O95415 125 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 LDOC1O95751 146 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 NPPAP01160 153 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGKV5-2P06315 115 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 PFN1P07737 140 aaKnown RBP1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 SLC35E2BP0CK96 405 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 INAFM2P0DMQ5 153 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 NQO2P16083 231 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ELK4P28324 431 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 TSPOP30536 169 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 SPAM1P38567 509 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 NUDT2P50583 147 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 RPS11P62280 158 aaKnown RBP eCLIP1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 FLI1Q01543 452 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 CD164Q04900 197 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 TPBGQ13641 420 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 USF2Q15853 346 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZBTB6Q15916 424 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 BSXQ3C1V8 233 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 TMEM215Q68D42 235 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 GLYATQ6IB77 296 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ERICH5Q6P6B1 374 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF773Q6PK81 442 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ACBD4Q8NC06 268 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF680Q8NEM1 530 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR4C13Q8NGP0 309 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR6K3Q8NGY3 331 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR8S1Q8NH09 359 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 CATSPER2Q96P56 530 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ACBD6Q9BR61 282 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ANGPTL4Q9BY76 406 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 VSIRQ9H7M9 311 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 TRIM45Q9H8W5 580 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 IFT46Q9NQC8 304 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 DIABLOQ9NR28 239 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF492Q9P255 531 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 SNX24Q9Y343 169 aa1.39□□□□□ -2.19
HMGB1P30-201ENST00000492455 AK9Q5TCS8 1911 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGHV3-43A0A0B4J1X8 118 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 PGPA6NDG6 321 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR6C70A6NIJ9 312 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 H3BP45 60 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 ISLRO14498 428 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 UBDO15205 165 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 RGS5O15539 181 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 PDCD6O75340 191 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 CA2P00918 260 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGHG2P01859 326 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 GP1BAP07359 652 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 PRTN3P24158 256 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 HLA-DMAP28067 261 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 RPA3P35244 121 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 AQP5P55064 265 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR2B6P58173 313 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 BNIP2Q12982 314 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 XRCC4Q13426 336 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 ENDOGQ14249 297 aaKnown RBP1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR4D1Q15615 310 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZFAND6Q6FIF0 208 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 DPPA2Q7Z7J5 298 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 MRPL52Q86TS9 123 aaKnown RBP1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 SYCE1Q8N0S2 351 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 C17orf78Q8N4C9 275 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 IFT81Q8WYA0 676 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 RORBQ92753 470 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 RBPMSQ93062 196 aaKnown RBP1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 FXYD5Q96DB9 178 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 SERPINB11Q96P15 392 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 PITX2Q99697 317 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF436Q9C0F3 470 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 SLC25A31Q9H0C2 315 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms