RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ZNF251Q9BRH9 671 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 MROQ9BYG7 248 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 NPFFR1Q9GZQ6 430 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 METTL9Q9H1A3 318 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 SEMA6AQ9H2E6 1030 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 PPA2Q9H2U2 334 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 PPP1R3EQ9H7J1 279 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 SEPSECSQ9HD40 501 aaKnown RBP7.44□□□□□ -1.22
HDAC3-212ENST00000492407 BRD7Q9NPI1 651 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 COA4Q9NYJ1 87 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 TMEM14AQ9Y6G1 99 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 U3KQV3 271 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 TMEM269A0A1B0GVZ9 245 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 A0A1W2PN81 502 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 B2RBV5 119 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF732B4DXR9 585 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 SLC1A7O00341 560 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 SLC31A2O15432 143 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 GSC2O15499 205 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 SPDEFO95238 335 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 CST1P01037 141 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 IGLV3-1P01715 115 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 MBP02144 154 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 RBP4P02753 201 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 IFNA4P05014 189 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 OSMP13725 252 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 CHRNA7P36544 502 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 CDKN1BP46527 198 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 MECP2P51608 486 aaKnown RBP7.43□□□□□ -1.22
HDAC3-212ENST00000492407 GPM6AP51674 278 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 ACTR3P61158 418 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 EMX1Q04741 257 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-212ENST00000492407 PPP1R8Q12972 351 aaKnown RBP7.43□□□□□ -1.22
HDAC3-212ENST00000492407 IL24Q13007 206 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 GINS1Q14691 196 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 SMIM21Q3B7S5 101 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 ASRGL1Q7L266 308 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 THAP5Q7Z6K1 395 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF573Q86YE8 665 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 POC1AQ8NBT0 407 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 ZNRF1Q8ND25 227 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 OR8B12Q8NGG6 310 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 LRRC20Q8TCA0 184 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 UFD1Q92890 307 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 OTULINQ96BN8 352 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 AJUBAQ96IF1 538 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 NSL1Q96IY1 281 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 TINAGL1Q9GZM7 467 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-212ENST00000492407 FGF23Q9GZV9 251 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-212ENST00000492407 OR51M1Q9H341 326 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 RIMS4Q9H426 269 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-212ENST00000492407 MED20Q9H944 212 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF556Q9HAH1 456 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 FAM206AQ9NX38 181 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 VNN3Q9NY84 501 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 USE1Q9NZ43 259 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 POLDIP2Q9Y2S7 368 aa7.43□□□□□ -1.22
HDAC3-212ENST00000492407 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
HDAC3-212ENST00000492407 FAM90A8PA6NJQ4 464 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 AQP12BA6NM10 295 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 MARCH11A6NNE9 402 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 DHRS7CA6NNS2 312 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 XPNPEP2O43895 674 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 RHBDL1O75783 438 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 IL1AP01583 271 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 SMIM6P0DI80 62 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 SLC2A5P22732 501 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 PRDX2P32119 198 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 CAPGP40121 348 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 GABRA2P47869 451 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 CAMLGP49069 296 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 LGALS4P56470 323 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 ERVFRD-1P60508 538 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 RPL31P62899 125 aaKnown RBP7.42□□□□□ -1.22
HDAC3-212ENST00000492407 MS4A2Q01362 244 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 KLRD1Q13241 179 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 TRIM16LQ309B1 348 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 BEAN1Q3B7T3 259 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 ACP7Q6ZNF0 438 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 LINC00299Q6ZSB3 139 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 CPOQ8IVL8 374 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 AQP12AQ8IXF9 295 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF679Q8IYX0 411 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 Q8N2B8 174 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 C11orf42Q8N5U0 333 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 TMEM185AQ8NFB2 350 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 PPP1R35Q8TAP8 253 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 FOXRED1Q96CU9 486 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-212ENST00000492407 MALSU1Q96EH3 234 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 CLPTM1LQ96KA5 538 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 PBOV1Q9GZY1 135 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 RBM38Q9H0Z9 239 aaKnown RBP7.42□□□□□ -1.22
HDAC3-212ENST00000492407 SAV1Q9H4B6 383 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-212ENST00000492407 MOB1AQ9H8S9 216 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 SEBOXQ9HB31 216 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-212ENST00000492407 SLC25A19Q9HC21 320 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 DNAJB9Q9UBS3 223 aa7.42□□□□□ -1.22
HDAC3-212ENST00000492407 NUFIP1Q9UHK0 495 aaKnown RBP7.42□□□□□ -1.22
HDAC3-212ENST00000492407 ENPP5Q9UJA9 477 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms