RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CHST4Q8NCG5 386 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 OR5AK2Q8NH90 309 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 NDNFQ8TB73 568 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 ZNF649Q9BS31 505 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 CNOT2Q9NZN8 540 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 DIMT1Q9UNQ2 313 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 MYRFQ9Y2G1 1151 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 GSTK1Q9Y2Q3 226 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 EFCAB10A6NFE3 127 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 ALDOBP05062 364 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 TMEM225BP0DP42 221 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 ZNF44P15621 663 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 KIR2DS4P43632 304 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 PROK1P58294 105 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 NANOS3P60323 173 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 ZNF273Q14593 569 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 FAM189A2Q15884 450 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 RPL22L1Q6P5R6 122 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 OR13C9Q8NGT0 318 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 CREB3L1Q96BA8 519 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 ADAT3Q96EY9 351 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 GPER1Q99527 375 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 S100A13Q99584 98 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 NKX3-1Q99801 234 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 VCX3BQ9H321 246 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 AMBNQ9NP70 447 aa13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 UBE2J1Q9Y385 318 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-217ENST00000491330 IGKV1-27A0A075B6S5 117 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 ZNF737O75373 536 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 IGHV1-8P0DP01 117 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 ERP29P30040 261 aaKnown RBP13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 SLC34A1Q06495 639 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 SCN1BQ07699 218 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 MINOS1Q5TGZ0 78 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 PARP16Q8N5Y8 322 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 OR11H6Q8NGC7 330 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 OR52N1Q8NH53 320 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 TMEM80Q96HE8 168 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 AKR1E2Q96JD6 320 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 HMG20AQ9NP66 347 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 PCDHB16Q9NRJ7 776 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 PLCXD1Q9NUJ7 323 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 RBFOX1Q9NWB1 397 aaKnown RBP13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 SESN1Q9Y6P5 492 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 MINOS1-NBL1R4GNA1 71 aa13.47□□□□□ -0.25
PDLIM2-217ENST00000491330 F2RL2O00254 374 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 TOR1AO14656 332 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 DEGS1O15121 323 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 SULT1B1O43704 296 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 LIMS3P0CW19 117 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 LIMS4P0CW20 117 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 RAB3AP20336 220 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 BCL3P20749 454 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 BRS3P32247 399 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 CEACAM3P40198 252 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 SNU13P55769 128 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 P2RX3P56373 397 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 TAS2R43P59537 309 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 HERPUD1Q15011 391 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 SSX2Q16385 188 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 HCP5Q6MZN7 132 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 RTN4RL2Q86UN3 420 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 OR4D6Q8NGJ1 314 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 ZNF596Q8TC21 504 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 THRSPQ92748 146 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 CHST6Q9GZX3 395 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 AASSQ9UDR5 926 aa13.46□□□□□ -0.25
PDLIM2-217ENST00000491330 VGLL3A8MV65 326 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 SIRPB1O00241 398 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 ZFPL1O95159 310 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 CSF1P09603 554 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 HTR1DP28221 377 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 DUSP1P28562 367 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 NPBWR2P48146 333 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 ZNF626Q68DY1 528 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 ASPHD2Q6ICH7 369 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 ZNF565Q8N9K5 539 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 CNIH3Q8TBE1 160 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 GPR148Q8TDV2 347 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 FBLIM1Q8WUP2 373 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 RFT1Q96AA3 541 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 CLEC7AQ9BXN2 247 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 PRSS22Q9GZN4 317 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 TMEM133Q9H2Q1 129 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 ISG20L2Q9H9L3 353 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 BABAM2Q9NXR7 383 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 TAS2R3Q9NYW6 316 aa13.45□□□□□ -0.26
PDLIM2-217ENST00000491330 IGKV1-9A0A0C4DH69 117 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 TMEM82A0PJX8 343 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 F8VVB4 439 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 F8VWA3 439 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 KDM4BO94953 1096 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 MTNR1BP49286 362 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 PRRX1P54821 245 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 PPP3R1P63098 170 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 SRSF4Q08170 494 aaKnown RBP13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 CDK5R1Q15078 307 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 KISS1Q15726 138 aa13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 SMN1Q16637 294 aaKnown RBP13.44□□□□□ -0.26
PDLIM2-217ENST00000491330 C11orf42Q8N5U0 333 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms