RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CLRN3Q8NCR9 226 aa19.59■□□□□ 0.73
USF3-203ENST00000491165 OR14K1Q8NGZ2 314 aa19.59■□□□□ 0.73
USF3-203ENST00000491165 IGKV1-9A0A0C4DH69 117 aa19.58■□□□□ 0.73
USF3-203ENST00000491165 FAM74A7A6NL05 159 aa19.58■□□□□ 0.73
USF3-203ENST00000491165 FAM74A3Q4VXF1 159 aa19.58■□□□□ 0.73
USF3-203ENST00000491165 BAP18Q8IXM2 172 aa19.58■□□□□ 0.73
USF3-203ENST00000491165 ZSCAN4Q8NAM6 433 aaPredicted RBP19.58■□□□□ 0.73
USF3-203ENST00000491165 JKAMPQ9P055 326 aa19.58■□□□□ 0.73
USF3-203ENST00000491165 ATG12O94817 140 aa19.58■□□□□ 0.72
USF3-203ENST00000491165 FAM27BQ5VT28 67 aa19.58■□□□□ 0.72
USF3-203ENST00000491165 OR1K1Q8NGR3 316 aa19.58■□□□□ 0.72
USF3-203ENST00000491165 RRNAD1Q96FB5 475 aaKnown RBP19.58■□□□□ 0.72
USF3-203ENST00000491165 H0YIZ8 118 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 MSTNO14793 375 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 ADAP1O75689 374 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 BEND4Q6ZU67 534 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 LHFPL1Q86WI0 220 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 FAM89BQ8N5H3 189 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 OR51T1Q8NGJ9 327 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 RNF141Q8WVD5 230 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 PGAM5Q96HS1 289 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 RTBDNQ9BSG5 229 aaPredicted RBP19.57■□□□□ 0.72
USF3-203ENST00000491165 TMEM100Q9NV29 134 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 TMEM218A2RU14 115 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 PI3P19957 117 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 TAS2R46P59540 309 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 SUPT4H1P63272 117 aaKnown RBP19.57■□□□□ 0.72
USF3-203ENST00000491165 FAM27E3Q08E93 113 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 ECH1Q13011 328 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 OR5T2Q8NGG2 359 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 OR13G1Q8NGZ3 307 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 CYTL1Q9NRR1 136 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 GHRLQ9UBU3 117 aa19.57■□□□□ 0.72
USF3-203ENST00000491165 A0A1W2PR80 420 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 LYL1P12980 280 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 KISS1Q15726 138 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 GABRA6Q16445 453 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 PRSS54Q6PEW0 395 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 MRGPRGQ86SM5 289 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 CYYR1Q96J86 154 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 TSNAXQ99598 290 aaKnown RBP19.56■□□□□ 0.72
USF3-203ENST00000491165 ST6GALNAC5Q9BVH7 336 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.56■□□□□ 0.72
USF3-203ENST00000491165 PCDHB16Q9NRJ7 776 aa19.56■□□□□ 0.72
USF3-203ENST00000491165 ERRFI1Q9UJM3 462 aaPredicted RBP19.56■□□□□ 0.72
USF3-203ENST00000491165 SPTBN1Q01082 2364 aaKnown RBP19.56■□□□□ 0.72
USF3-203ENST00000491165 USP9XQ93008 2570 aaPredicted RBP19.55■□□□□ 0.72
USF3-203ENST00000491165 PRF1P14222 555 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 GUCA1AP43080 201 aaPredicted RBP19.55■□□□□ 0.72
USF3-203ENST00000491165 PTGFRP43088 359 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 LSM6P62312 80 aaKnown RBP19.55■□□□□ 0.72
USF3-203ENST00000491165 STK11Q15831 433 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 ANKRD55Q3KP44 614 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 C4orf17Q53FE4 359 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 NKAPLQ5M9Q1 402 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 CSNK2A3Q8NEV1 391 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 OR5D18Q8NGL1 313 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 BCL2L2Q92843 193 aaPredicted RBP19.55■□□□□ 0.72
USF3-203ENST00000491165 ARL11Q969Q4 196 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 ABCD4O14678 606 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 HLA-HP01893 362 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 CD79AP11912 226 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 CCKARP32238 428 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 ALDH3B1P43353 468 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 SNU13P55769 128 aaKnown RBP19.55■□□□□ 0.72
USF3-203ENST00000491165 PABPC1L2AQ5JQF8 200 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 AADACL3Q5VUY0 350 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 C22orf34Q6ZV56 151 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 PRR13Q9NZ81 148 aa19.55■□□□□ 0.72
USF3-203ENST00000491165 NUDT19A8MXV4 375 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 HTR3BO95264 441 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 IGLV3-1P01715 115 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 SVBPQ8N300 66 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 TMED6Q8WW62 240 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 LYZL4Q96KX0 146 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 METTL8Q9H825 291 aaKnown RBP19.54■□□□□ 0.72
USF3-203ENST00000491165 EHFQ9NZC4 300 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 FOXI3A8MTJ6 420 aaPredicted RBP19.54■□□□□ 0.72
USF3-203ENST00000491165 MMP7P09237 267 aaPredicted RBP19.54■□□□□ 0.72
USF3-203ENST00000491165 ZNF32P17041 273 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 IL32P24001 234 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 THBS4P35443 961 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 NRN1LQ496H8 165 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 SLC16A14Q7RTX9 510 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 NPRL2Q8WTW4 380 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 AQP10Q96PS8 301 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 OR5AC2Q9NZP5 309 aa19.54■□□□□ 0.72
USF3-203ENST00000491165 PURGQ9UJV8 347 aaKnown RBP19.54■□□□□ 0.72
USF3-203ENST00000491165 C5orf63A6NC05 138 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 NKX2-6A6NCS4 301 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 MSGN1A6NI15 193 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 SDCBPO00560 298 aaPredicted RBP19.53■□□□□ 0.72
USF3-203ENST00000491165 ZG16O60844 167 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 CST2P09228 141 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 PET100P0DJ07 73 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 BLVRBP30043 206 aaPredicted RBP19.53■□□□□ 0.72
USF3-203ENST00000491165 CHRNB4P30926 498 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 AKR1C2P52895 323 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 AKR1C1Q04828 323 aa19.53■□□□□ 0.72
USF3-203ENST00000491165 P2RY6Q15077 328 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms