RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 Q7L0L9 218 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC16A14Q7RTX9 510 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PRSS41Q7RTY9 318 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TRAPPC6BQ86SZ2 158 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 BIVMQ86UB2 503 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 MARCH3Q86UD3 253 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 LHFPL1Q86WI0 220 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C17orf82Q86X59 251 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 KMT5CQ86Y97 462 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C9orf40Q8IXQ3 194 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF101Q8IZC7 436 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PUSL1Q8N0Z8 303 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 LRRC18Q8N456 261 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 JAGN1Q8N5M9 183 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RFLNBQ8N5W9 214 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 METTL27Q8N6F8 245 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 LRTM2Q8N967 370 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ZSCAN4Q8NAM6 433 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ADAD2Q8NCV1 583 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 LFNGQ8NES3 379 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GJC3Q8NFK1 279 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC26A10Q8NG04 563 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR4S1Q8NGB4 309 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR9K2Q8NGE7 335 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR4D6Q8NGJ1 314 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR51A4Q8NGJ6 313 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR51T1Q8NGJ9 327 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR5H2Q8NGV7 314 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR10AC1Q8NH08 325 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR8K3Q8NH51 312 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR52N5Q8NH56 324 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR6X1Q8NH79 312 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NUBPLQ8TB37 319 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 MARCH1Q8TCQ1 289 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RXFP4Q8TDU9 374 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ST7LQ8TDW4 575 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PAQR8Q8TEZ7 354 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CASTOR1Q8WTX7 329 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SFT2D1Q8WV19 159 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RNF133Q8WVZ7 376 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FGF14Q92915 247 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 BADQ92934 168 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NTNG2Q96CW9 530 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLAMF6Q96DU3 332 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 MALSU1Q96EH3 234 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NARS2Q96I59 477 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 UHRF2Q96PU4 802 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 AMELYQ99218 206 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C12orf57Q99622 126 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SULT4A1Q9BR01 284 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NAA11Q9BSU3 229 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RPP25Q9BUL9 199 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PBDC1Q9BVG4 233 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ST6GALNAC5Q9BVH7 336 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SUCNR1Q9BXA5 334 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C1QTNF6Q9BXI9 259 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 MRPL13Q9BYD1 178 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR8D2Q9GZM6 311 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC5A7Q9GZV3 580 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PBOV1Q9GZY1 135 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CST11Q9H112 138 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NXF5Q9H1B4 397 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 LPAR5Q9H1C0 372 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC25A18Q9H1K4 315 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SYT4Q9H2B2 425 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ARV1Q9H2C2 271 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR51M1Q9H341 326 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 HRH4Q9H3N8 390 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RGCCQ9H4X1 137 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C5orf66Q9H5L9 145 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PLEKHF2Q9H8W4 249 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RNF122Q9H9V4 155 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 LMAN1LQ9HAT1 526 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TAF9BQ9HBM6 251 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 KCNJ16Q9NPI9 418 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 STARD5Q9NSY2 213 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CUTCQ9NTM9 273 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PLEKHJ1Q9NW61 149 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM242Q9NWH2 141 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C1orf123Q9NWV4 160 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 WSB2Q9NYS7 404 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 COQ3Q9NZJ6 369 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GSKIPQ9P0R6 139 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 MYEF2Q9P2K5 600 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 METTL1Q9UBP6 276 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 COPS7AQ9UBW8 275 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ANAPC10Q9UM13 185 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C14orf166Q9Y224 244 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OSGIN2Q9Y236 505 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 VSIG4Q9Y279 399 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 KLHDC2Q9Y2U9 406 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NSG2Q9Y328 171 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 STRAPQ9Y3F4 350 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TMED3Q9Y3Q3 217 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM184BQ9Y519 407 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PCDHGA1Q9Y5H4 931 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CSAG2Q9Y5P2 127 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FLVCR1Q9Y5Y0 555 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 KPTNQ9Y664 436 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 DOCK11Q5JSL3 2073 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms