RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 IL18R1Q13478 541 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 KISS1Q15726 138 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 LINC01006Q8NI28 216 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 GPR148Q8TDV2 347 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 GPER1Q99527 375 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 PPA2Q9H2U2 334 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 VCXQ9H320 206 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 TBL2Q9Y4P3 447 aaKnown RBP14.2□□□□□ -0.14
SEC13-218ENST00000490283 NBEAL1Q6ZS30 2694 aa14.2□□□□□ -0.14
SEC13-218ENST00000490283 IGKV1-12A0A0C4DH73 117 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 MEX3AA1L020 520 aaKnown RBP14.19□□□□□ -0.14
SEC13-218ENST00000490283 PSPNO60542 156 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 OR2H2O95918 312 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 IGKV1D-12P01611 117 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 ERP29P30040 261 aaKnown RBP14.19□□□□□ -0.14
SEC13-218ENST00000490283 SOX2P48431 317 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 GTF2A1P52655 376 aaPredicted RBP14.19□□□□□ -0.14
SEC13-218ENST00000490283 DLX6P56179 175 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 P2RX3P56373 397 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 SCN1BQ07699 218 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 DYNC1I2Q13409 638 aaKnown RBP14.19□□□□□ -0.14
SEC13-218ENST00000490283 CDK5R1Q15078 307 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 Q6ZSV7 163 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 TPRX1Q8N7U7 411 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 CHST4Q8NCG5 386 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 OR4S1Q8NGB4 309 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 OR52N4Q8NGI2 321 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 C17orf50Q8WW18 174 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 ABCB10Q9NRK6 738 aa14.19□□□□□ -0.14
SEC13-218ENST00000490283 DIMT1Q9UNQ2 313 aaKnown RBP14.19□□□□□ -0.14
SEC13-218ENST00000490283 TRGV10A0A0A0MS01 117 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 CLPXO76031 633 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 OR3A1P47881 315 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 ETV1P50549 477 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 PPP3R1P63098 170 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 LY6EQ16553 131 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 LIAT1Q6ZQX7 453 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 SATL1Q86VE3 508 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 C8orf59Q8N0T1 100 aaPredicted RBP14.18□□□□□ -0.14
SEC13-218ENST00000490283 DTX3Q8N9I9 347 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 TMEM80Q96HE8 168 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 GAL3ST2Q9H3Q3 398 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 C16orf95Q9H693 158 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 BABAM2Q9NXR7 383 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 UBE2J1Q9Y385 318 aaPredicted RBP14.18□□□□□ -0.14
SEC13-218ENST00000490283 SESN1Q9Y6P5 492 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 HSPE1-MOB4S4R3N1 261 aa14.18□□□□□ -0.14
SEC13-218ENST00000490283 TIMM23O14925 209 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 DEGS1O15121 323 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 TSPAN9O75954 239 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 MTNR1BP49286 362 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 OR2G6Q5TZ20 316 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 ZNF626Q68DY1 528 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 OR11H6Q8NGC7 330 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 OR4C13Q8NGP0 309 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 TNFAIP8L1Q8WVP5 186 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 MALSU1Q96EH3 234 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 FAM192AQ9GZU8 254 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 TAS2R4Q9NYW5 299 aa14.17□□□□□ -0.14
SEC13-218ENST00000490283 EFCAB10A6NFE3 127 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 ODF3BA8MYP8 253 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 M0QZ24 198 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 LMO1P25800 156 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 GABRA5P31644 462 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 CAPGP40121 348 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 ZP1P60852 638 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 ADARB1P78563 741 aaKnown RBP14.16□□□□□ -0.14
SEC13-218ENST00000490283 RSU1Q15404 277 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 FAM189A2Q15884 450 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 OR52W1Q6IF63 320 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 TREML4Q6UXN2 200 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 TCF23Q7RTU1 214 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 LHFPL4Q7Z7J7 247 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 PXT1Q8NFP0 134 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 OR52N1Q8NH53 320 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 TMEM106AQ96A25 262 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 SMIM19Q96E16 107 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 S100A13Q99584 98 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 CITED1Q99966 193 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 TCF7L1Q9HCS4 588 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 PITPNC1Q9UKF7 332 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 ZNF281Q9Y2X9 895 aa14.16□□□□□ -0.14
SEC13-218ENST00000490283 FAM90A8PA6NJQ4 464 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 H3BUI4 141 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 CSN2P05814 226 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 PROK1P58294 105 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 AESQ08117 197 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 SSX2Q16385 188 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 PLA1AQ53H76 456 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 KRBOX4Q5JUW0 171 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 MINOS1Q5TGZ0 78 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 XAF1Q6GPH4 301 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 RNF144BQ7Z419 303 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 NDNFQ8TB73 568 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 RPS4Y2Q8TD47 263 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 RGP1Q92546 391 aaPredicted RBP14.15□□□□□ -0.14
SEC13-218ENST00000490283 AJUBAQ96IF1 538 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 NR1H4Q96RI1 486 aaPredicted RBP14.15□□□□□ -0.14
SEC13-218ENST00000490283 CLEC7AQ9BXN2 247 aa14.15□□□□□ -0.14
SEC13-218ENST00000490283 NPFFR1Q9GZQ6 430 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms