RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, human

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-210	ENST00000489948	GABRR1	P24046	479 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	MDH2	P40926	338 aa	Known RBP	11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	PITPNB	P48739	271 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	VEGFC	P49767	419 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	PDLIM4	P50479	330 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	ATP5J2	P56134	94 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	DSCR9	P59020	149 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	HOXA4	Q00056	320 aa	Predicted RBP	11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	PAX5	Q02548	391 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	IKZF1	Q13422	519 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZMYND11	Q15326	602 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	TAF9	Q16594	264 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	DEFB113	Q30KQ7	82 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	MOGAT2	Q3SYC2	334 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	TMEM69	Q5SWH9	247 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	SHE	Q5VZ18	495 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	DNM1P46	Q6ZS02	220 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	OR4M1	Q8NGD0	313 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	PHF21A	Q96BD5	680 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	LURAP1	Q96LR2	239 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	AKIP1	Q9NQ31	210 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	EXTL2	Q9UBQ6	330 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948		V9GYH0	126 aa		11.18	□□□□□ -0.62
TRAIP-210	ENST00000489948	NKX6-3	A6NJ46	265 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	RFPL4A	A6NLU0	287 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	RFPL4AL1	F8VTS6	287 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	LYNX1	G3V0Z9	82 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	MFNG	O00587	321 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	TNFRSF13B	O14836	293 aa	Predicted RBP	11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	SOCS1	O15524	211 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	CA11	O75493	328 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	OR2H2	O95918	312 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	CSN2	P05814	226 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	GSTP1	P09211	210 aa	Known RBP	11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	LYNX1	P0DP58	116 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	HIST1H1D	P16402	221 aa	Known RBP	11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	FUT3	P21217	361 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	BLVRB	P30043	206 aa	Predicted RBP	11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	KCNJ3	P48549	501 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	TMEM50B	P56557	158 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	LSAMP	Q13449	338 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	SPANXN2	Q5MJ10	180 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	FAM201A	Q5SY85	155 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZNF788	Q6ZQV5	615 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	DCDC5	Q6ZRR9	648 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZNF525	Q8N782	197 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	C15orf40	Q8WUR7	153 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	S100Z	Q8WXG8	99 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	ST8SIA4	Q92187	359 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	RAB1C	Q92928	201 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	RAB3C	Q96E17	227 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	SEH1L	Q96EE3	360 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	DIRAS2	Q96HU8	199 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	KAAG1	Q9UBP8	84 aa		11.17	□□□□□ -0.62
TRAIP-210	ENST00000489948	IGHV3OR15-7	A0A075B7D8	119 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	TRAV24	A0A0B4J272	114 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	SERPINE3	A8MV23	424 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	SLC33A1	O00400	549 aa	Predicted RBP	11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	SIGLEC5	O15389	551 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZNF737	O75373	536 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	MELTF	P08582	738 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	PRDX2	P32119	198 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	GPR6	P46095	362 aa	Predicted RBP	11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	SNU13	P55769	128 aa	Known RBP	11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	TAS2R20	P59543	309 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	GMFB	P60983	142 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZNF260	Q3ZCT1	412 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	PLAC9	Q5JTB6	97 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	PYHIN1	Q6K0P9	492 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	CLEC2A	Q6UVW9	174 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	MFSD4A	Q8N468	514 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZNF561	Q8N587	486 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	SPIC	Q8N5J4	248 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	CD177	Q8N6Q3	437 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	BOLL	Q8N9W6	283 aa	Known RBP	11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	PERP	Q96FX8	193 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	ARHGAP5-AS1	Q96IT6	56 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	GAFA1	Q96PS6	74 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	NEDD4L	Q96PU5	975 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	FAM234A	Q9H0X4	552 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZNF665	Q9H7R5	613 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	TMEM165	Q9HC07	324 aa		11.16	□□□□□ -0.62
TRAIP-210	ENST00000489948	DEGS1	O15121	323 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	CTDSPL	O15194	276 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	PPIH	O43447	177 aa	Known RBP	11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	SSX4	O60224	188 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	INHBB	P09529	407 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZNF44	P15621	663 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	AMY2B	P19961	511 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	DUSP1	P28562	367 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	RBMX	P38159	391 aa	Known RBP	11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	IL13RA1	P78552	427 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	MRPS10	P82664	201 aa	Known RBP	11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	ZNF45	Q02386	682 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	COL10A1	Q03692	680 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	RBM39	Q14498	530 aa	Known RBP	11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	PNLIPRP3	Q17RR3	467 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948		Q6ZTK2	550 aa		11.15	□□□□□ -0.62
TRAIP-210	ENST00000489948	SLC36A1	Q7Z2H8	476 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms