RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CBX5P45973 191 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 GNG2P59768 71 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 AP3S2P59780 193 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 CCL8P80075 99 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 IKZF1Q13422 519 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 RNASE12Q5GAN4 147 aaKnown RBP11.92□□□□□ -0.5
VPS26A-205ENST00000489656 OLFML2AQ68BL7 652 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
VPS26A-205ENST00000489656 TOMM5Q8N4H5 51 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 POC5Q8NA72 575 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 MINDY2Q8NBR6 621 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 CHPT1Q8WUD6 406 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 NUDCD2Q8WVJ2 157 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 HPS1Q92902 700 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 SULT4A1Q9BR01 284 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 OCSTAMPQ9BR26 566 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 SAP30LQ9HAJ7 183 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 DECR2Q9NUI1 292 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 RALYQ9UKM9 306 aaKnown RBP11.92□□□□□ -0.5
VPS26A-205ENST00000489656 PPP1R3CQ9UQK1 317 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 LRBAP50851 2863 aa11.92□□□□□ -0.5
VPS26A-205ENST00000489656 WNT9BO14905 357 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 CD8AP01732 235 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 CSF1P09603 554 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 EGR1P18146 543 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 NAT1P18440 290 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 LMO1P25800 156 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 RCVRNP35243 200 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 ARFRP1Q13795 201 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 NKAPLQ5M9Q1 402 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 SHEQ5VZ18 495 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 TRAPPC6BQ86SZ2 158 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 ZCCHC24Q8N2G6 241 aaKnown RBP11.91□□□□□ -0.5
VPS26A-205ENST00000489656 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
VPS26A-205ENST00000489656 C11orf54Q9H0W9 315 aaPredicted RBP11.91□□□□□ -0.5
VPS26A-205ENST00000489656 WDR13Q9H1Z4 485 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 GLS2Q9UI32 602 aa11.91□□□□□ -0.5
VPS26A-205ENST00000489656 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 LRRK2Q5S007 2527 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 TRAV24A0A0B4J272 114 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 LRRC30A6NM36 301 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 J3QKU1 62 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 SH2D1BO14796 132 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 DEGS1O15121 323 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 LYRM1O43325 122 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 DTYMKP23919 212 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
VPS26A-205ENST00000489656 TLE4Q04727 773 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 SPTAN1Q13813 2472 aaKnown RBP11.9□□□□□ -0.5
VPS26A-205ENST00000489656 RBM39Q14498 530 aaKnown RBP11.9□□□□□ -0.5
VPS26A-205ENST00000489656 OXA1LQ15070 435 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 TMEM229BQ8NBD8 167 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 SUMF2Q8NBJ7 301 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 COX4I2Q96KJ9 171 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 FAAP24Q9BTP7 215 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 CHST6Q9GZX3 395 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 AK3Q9UIJ7 227 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 CACNG2Q9Y698 323 aa11.9□□□□□ -0.5
VPS26A-205ENST00000489656 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 MEIS3P1A6NDR6 274 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 NAP1L6A6NFF2 107 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 POM121CA8CG34 1229 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 CENPXA8MT69 81 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 MCRIP1C9JLW8 97 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 SLC33A1O00400 549 aaPredicted RBP11.89□□□□□ -0.51
VPS26A-205ENST00000489656 OR2H2O95918 312 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 HAND1O96004 215 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 SOD3P08294 240 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 IRF2P14316 349 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 DUSP1P28562 367 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 MDH2P40926 338 aaKnown RBP11.89□□□□□ -0.51
VPS26A-205ENST00000489656 TAS2R19P59542 299 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 PDCD1Q15116 288 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 C1orf87Q8N0U7 546 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 CYYR1Q96J86 154 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 CMSS1Q9BQ75 279 aaKnown RBP11.89□□□□□ -0.51
VPS26A-205ENST00000489656 DPCDQ9BVM2 203 aaPredicted RBP11.89□□□□□ -0.51
VPS26A-205ENST00000489656 RAB1BQ9H0U4 201 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 IFT46Q9NQC8 304 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 NLKQ9UBE8 527 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 COL12A1Q99715 3063 aa11.89□□□□□ -0.51
VPS26A-205ENST00000489656 TRBV6-6A0A0A6YYG2 114 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 CLDN1O95832 211 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 NAPSAO96009 420 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 CD74P04233 296 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 PSG2P11465 335 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 ZNF44P15621 663 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 MUC1P15941 1255 aaPredicted RBP11.88□□□□□ -0.51
VPS26A-205ENST00000489656 TBPP20226 339 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 RFX2P48378 723 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 KCNJ3P48549 501 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 GMFBP60983 142 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 SRSF7Q16629 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
VPS26A-205ENST00000489656 HOGA1Q86XE5 327 aa11.88□□□□□ -0.51
VPS26A-205ENST00000489656 GAPTQ8N292 157 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms