RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 NCR3LG1Q68D85 454 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 ORAI1Q96D31 301 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 ZNF48Q96MX3 618 aaPredicted RBP14.24□□□□□ -0.13
MDC1-206ENST00000489540 DERL3Q96Q80 235 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 C19orf24Q9BVV8 132 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 PRDM13Q9H4Q3 707 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 ISYNA1Q9NPH2 558 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 SIRT7Q9NRC8 400 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 A0A1W2PPK0 400 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 DENRO43583 198 aaKnown RBP14.24□□□□□ -0.13
MDC1-206ENST00000489540 OR2H2O95918 312 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 EEF1B2P24534 225 aaKnown RBP14.24□□□□□ -0.13
MDC1-206ENST00000489540 SNU13P55769 128 aaKnown RBP14.24□□□□□ -0.13
MDC1-206ENST00000489540 EDDM3BP56851 147 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 MEF2CQ06413 473 aaPredicted RBP14.24□□□□□ -0.13
MDC1-206ENST00000489540 BAMBIQ13145 260 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 GRK1Q15835 563 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 CDH26Q8IXH8 852 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 PHC2Q8IXK0 858 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 ZDHHC22Q8N966 263 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 CHST4Q8NCG5 386 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 Q8NFD4 153 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 FAM216AQ8WUB2 273 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 UFD1Q92890 307 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 TNFRSF14Q92956 283 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 ZDHHC16Q969W1 377 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 S100A13Q99584 98 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 FAM192AQ9GZU8 254 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 METTL9Q9H1A3 318 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 NOX4Q9NPH5 578 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 PCDHB16Q9NRJ7 776 aa14.24□□□□□ -0.13
MDC1-206ENST00000489540 SOX21Q9Y651 276 aaPredicted RBP14.24□□□□□ -0.13
MDC1-206ENST00000489540 TRAV8-7A0A075B6U6 113 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 MGST3O14880 152 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 DEGS1O15121 323 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 PSPNO60542 156 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 DEFB112Q30KQ8 113 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 ACSM3Q53FZ2 586 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 RUSC1-AS1Q66K80 236 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 UNQ9370/PRO34162Q6UXP9 181 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 ZMAT3Q9HA38 289 aaKnown RBP14.23□□□□□ -0.13
MDC1-206ENST00000489540 ESM1Q9NQ30 184 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 ING4Q9UNL4 249 aa14.23□□□□□ -0.13
MDC1-206ENST00000489540 SF3B6Q9Y3B4 125 aaKnown RBP14.23□□□□□ -0.13
MDC1-206ENST00000489540 COL6A5A8TX70 2615 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 hADV38S2A0JD32 116 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 FUOMA2VDF0 154 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 RNASEK-C17orf49H0YIS7 233 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 CLDN34H7C241 214 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 SIRPB1O00241 398 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 PIN1P1O15428 100 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 ZNF780AO75290 641 aaPredicted RBP14.22□□□□□ -0.13
MDC1-206ENST00000489540 HSMCR30P0CW71 290 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 ZNF44P15621 663 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 ERP29P30040 261 aaKnown RBP14.22□□□□□ -0.13
MDC1-206ENST00000489540 OR3A4PP47883 348 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 UBE2E1P51965 193 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 UBA52P62987 128 aaKnown RBP14.22□□□□□ -0.13
MDC1-206ENST00000489540 SCN1BQ07699 218 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 TPBGQ13641 420 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 Q6P435 159 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 PDZD9Q8IXQ8 264 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 OR4S1Q8NGB4 309 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 OR51T1Q8NGJ9 327 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 TMED9Q9BVK6 235 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 HEXA-AS1Q9H8Q6 139 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 IL36GQ9NZH8 169 aa14.22□□□□□ -0.13
MDC1-206ENST00000489540 FBN1P35555 2871 aaKnown RBP14.21□□□□□ -0.13
MDC1-206ENST00000489540 A0A0G2JK05 382 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 MEGF11A6BM72 1044 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 MRPS14O60783 128 aaKnown RBP14.21□□□□□ -0.13
MDC1-206ENST00000489540 CSTBP04080 98 aaKnown RBP14.21□□□□□ -0.13
MDC1-206ENST00000489540 MLLT11Q13015 90 aaPredicted RBP14.21□□□□□ -0.13
MDC1-206ENST00000489540 GPR176Q14439 515 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 EDDM3AQ14507 147 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 ZNF273Q14593 569 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 IL13RA2Q14627 380 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 C11orf42Q8N5U0 333 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 NR1H4Q96RI1 486 aaPredicted RBP14.21□□□□□ -0.13
MDC1-206ENST00000489540 YTHDF1Q9BYJ9 559 aaKnown RBP14.21□□□□□ -0.13
MDC1-206ENST00000489540 CHST6Q9GZX3 395 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 FAM96BQ9Y3D0 163 aa14.21□□□□□ -0.13
MDC1-206ENST00000489540 C17orf98A8MV24 154 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 NPFFO15130 113 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 CDRT1O95170 752 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 HTR3BO95264 441 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 MAS1P04201 325 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 ZNF728P0DKX0 622 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 OR3A1P47881 315 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 P2RX3P56373 397 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 TRAM1Q15629 374 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 LIPKQ5VXJ0 399 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 Q6YL49 198 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 CEACAM19Q7Z692 300 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 JAGN1Q8N5M9 183 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 NKAIN3Q8N8D7 197 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 SLC25A28Q96A46 364 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 MGLLQ99685 303 aa14.2□□□□□ -0.14
MDC1-206ENST00000489540 TCF7L1Q9HCS4 588 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms