RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ZNF846Q147U1 533 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 MICBQ29980 383 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 ATPAF1Q5TC12 328 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-208ENST00000488989 FAM131AQ6UXB0 335 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 Q6ZTK2 550 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 IZUMO1Q8IYV9 350 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 DTX3Q8N9I9 347 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 BOLLQ8N9W6 283 aaKnown RBP13.41□□□□□ -0.26
CLDN11-208ENST00000488989 CHST4Q8NCG5 386 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 OR4M2Q8NGB6 313 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 ST8SIA4Q92187 359 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 RAB3CQ96E17 227 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 ARHGAP5-AS1Q96IT6 56 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 ABHD1Q96SE0 405 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 PECRQ9BY49 303 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 SRRQ9GZT4 340 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 DNTTIP1Q9H147 329 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 AUNIPQ9H7T9 357 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 CHODLQ9H9P2 273 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 MYOZ1Q9NP98 299 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-208ENST00000488989 DNAJB11Q9UBS4 358 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 KCNK7Q9Y2U2 307 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 DOCK11Q5JSL3 2073 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 DSCAML1Q8TD84 2053 aa13.41□□□□□ -0.26
CLDN11-208ENST00000488989 TRAV24A0A0B4J272 114 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 DEGS1O15121 323 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 OR2H2O95918 312 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 IGHV4-39P01824 125 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 AMY2BP19961 511 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 CD40LGP29965 261 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 PRDX2P32119 198 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 TMEM33P57088 247 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 PITPNAQ00169 270 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 IL18Q14116 193 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 PDCD1Q15116 288 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 PNLIPRP3Q17RR3 467 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 CDNFQ49AH0 187 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 SHEQ5VZ18 495 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 SFRP4Q6FHJ7 346 aaPredicted RBP13.4□□□□□ -0.26
CLDN11-208ENST00000488989 DNM1P46Q6ZS02 220 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 RTN4RL2Q86UN3 420 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 CD177Q8N6Q3 437 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 NRGNQ92686 78 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 SDSLQ96GA7 329 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 NEDD4LQ96PU5 975 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 GSX2Q9BZM3 304 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 BARX1Q9HBU1 254 aaPredicted RBP13.4□□□□□ -0.26
CLDN11-208ENST00000488989 TMEM165Q9HC07 324 aa13.4□□□□□ -0.26
CLDN11-208ENST00000488989 IGHV3OR15-7A0A075B7D8 119 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 SERPINE3A8MV23 424 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 SLC33A1O00400 549 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-208ENST00000488989 IGHV2-70P01814 119 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 ZNF44P15621 663 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 GNB3P16520 340 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 PPP5CP53041 499 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 BTG1P62324 171 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 MRPS10P82664 201 aaKnown RBP13.39□□□□□ -0.27
CLDN11-208ENST00000488989 ZNF788Q6ZQV5 615 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 C6orf201Q7Z4U5 140 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 C19orf18Q8NEA5 215 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 SDHCQ99643 169 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-208ENST00000488989 PLEKHJ1Q9NW61 149 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 OR14J1Q9UGF5 321 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 EDARQ9UNE0 448 aa13.39□□□□□ -0.27
CLDN11-208ENST00000488989 MRPS7Q9Y2R9 242 aaKnown RBP13.39□□□□□ -0.27
CLDN11-208ENST00000488989 SULT1C2O00338 296 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 NDUFA2O43678 99 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 GSTZ1O43708 216 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-208ENST00000488989 ZNF737O75373 536 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 ZNF205O95201 554 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 GIFP27352 417 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 CEBPDP49716 269 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-208ENST00000488989 MADCAM1Q13477 382 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 ZMYND11Q15326 602 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 KCNJ8Q15842 424 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 ATAD3CQ5T2N8 411 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 HACD4Q5VWC8 232 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 PEG10Q86TG7 708 aaKnown RBP13.38□□□□□ -0.27
CLDN11-208ENST00000488989 SUMF2Q8NBJ7 301 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 CYYR1Q96J86 154 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 SULT4A1Q9BR01 284 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 ZMAT3Q9HA38 289 aaKnown RBP13.38□□□□□ -0.27
CLDN11-208ENST00000488989 SCPEP1Q9HB40 452 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 KAAG1Q9UBP8 84 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 METRNQ9UJH8 293 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 TACC2O95359 2948 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 CENPEQ02224 2701 aa13.38□□□□□ -0.27
CLDN11-208ENST00000488989 TMEM82A0PJX8 343 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 TMEM235A6NFC5 223 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 MCRIP1C9JLW8 97 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 GABARAPH6UMI1 98 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 SIRPB1O00241 398 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 SIGLEC5O15389 551 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 PSPNO60542 156 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 GYPAP02724 150 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 MDH2P40926 338 aaKnown RBP13.37□□□□□ -0.27
CLDN11-208ENST00000488989 KCNJ3P48549 501 aa13.37□□□□□ -0.27
CLDN11-208ENST00000488989 PAX5Q02548 391 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms