RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 LPAR6P43657 344 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 ARHGDIBP52566 201 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 AKR1C2P52895 323 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 SRPXP78539 464 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 AKR1C1Q04828 323 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 DAZAP2Q15038 168 aaPredicted RBP12.25□□□□□ -0.45
ABCB1-207ENST00000488737 GUCA2BQ16661 112 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 GPR157Q5UAW9 335 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 BTNL8Q6UX41 500 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 SMOC1Q9H4F8 434 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 OPA3Q9H6K4 179 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 RHOFQ9HBH0 211 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 TMED3Q9Y3Q3 217 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 CUL9Q8IWT3 2517 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 SHANK1Q9Y566 2161 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 FAM221AA4D161 298 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 ATP6V1G2-DDX39BF2Z307 99 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 GPR137BO60478 399 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 OR7C1O76099 320 aaPredicted RBP12.25□□□□□ -0.45
ABCB1-207ENST00000488737 AADACP22760 399 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 F2RL1P55085 397 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 SRSF3P84103 164 aaKnown RBP12.25□□□□□ -0.45
ABCB1-207ENST00000488737 SP6Q3SY56 376 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 DHRS7BQ6IAN0 325 aaPredicted RBP12.25□□□□□ -0.45
ABCB1-207ENST00000488737 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 OR56B2PQ8NGI1 322 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 LYPD6BQ8NI32 183 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 GLYATL2Q8WU03 294 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 APOBEC3DQ96AK3 386 aaPredicted RBP12.25□□□□□ -0.45
ABCB1-207ENST00000488737 SIGLEC12Q96PQ1 595 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 HRH4Q9H3N8 390 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 NDRG3Q9UGV2 375 aa12.25□□□□□ -0.45
ABCB1-207ENST00000488737 SS18L1O75177 396 aaPredicted RBP12.24□□□□□ -0.45
ABCB1-207ENST00000488737 SCGB1D2O95969 90 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 F10P00742 488 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 PPYP01298 95 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 IGHV3-9P01782 118 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 P2RY1P47900 373 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 FGF12P61328 243 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 PRDX4Q13162 271 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 PHLDA2Q53GA4 152 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 Q6ZPA2 131 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 LYZL2Q7Z4W2 148 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 LDLRAD3Q86YD5 345 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 NRIP2Q9BQI9 281 aa12.24□□□□□ -0.45
ABCB1-207ENST00000488737 PAPOLGQ9BWT3 736 aaKnown RBP12.24□□□□□ -0.45
ABCB1-207ENST00000488737 RCC2Q9P258 522 aaKnown RBP12.24□□□□□ -0.45
ABCB1-207ENST00000488737 FREM1Q5H8C1 2179 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 SP9P0CG40 484 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 NME2P22392 152 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 ARR3P36575 388 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 MPLP40238 635 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 NPBWR2P48146 333 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 RND3P61587 244 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 MPV17LQ2QL34 196 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 CEACAM21Q3KPI0 293 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 TCEAL6Q6IPX3 200 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 MRPL21Q7Z2W9 205 aaKnown RBP12.23□□□□□ -0.45
ABCB1-207ENST00000488737 TUSC5Q8IXB3 177 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 ZDHHC23Q8IYP9 409 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 NAXEQ8NCW5 288 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 OR5L1Q8NGL2 311 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 EXTL1Q92935 676 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 TCEAL3Q969E4 200 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 COL25A1Q9BXS0 654 aaPredicted RBP12.23□□□□□ -0.45
ABCB1-207ENST00000488737 TLNRD1Q9H1K6 362 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 FAM212BQ9NTI7 297 aaPredicted RBP12.23□□□□□ -0.45
ABCB1-207ENST00000488737 PHF1O43189 567 aaPredicted RBP12.23□□□□□ -0.45
ABCB1-207ENST00000488737 FBXO24O75426 580 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 NAPSAO96009 420 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 CD5P06127 495 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 GLAP06280 429 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 SEC11BP0C7V7 166 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 MUC1P15941 1255 aaPredicted RBP12.23□□□□□ -0.45
ABCB1-207ENST00000488737 BCL3P20749 454 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 FLI1Q01543 452 aaPredicted RBP12.23□□□□□ -0.45
ABCB1-207ENST00000488737 SRYQ05066 204 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 OR1C1Q15619 314 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 LPAL2Q16609 132 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 HAGHLQ6PII5 290 aaPredicted RBP12.23□□□□□ -0.45
ABCB1-207ENST00000488737 FBXW12Q6X9E4 464 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 MKXQ8IYA7 352 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 HPSE2Q8WWQ2 592 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 TTTY12Q9BZ98 90 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 Q9N2K0 584 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 PRELID1Q9Y255 219 aa12.23□□□□□ -0.45
ABCB1-207ENST00000488737 CFAP54Q96N23 3096 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 C5orf49A4QMS7 147 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 RNASEK-C17orf49H0YIS7 233 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 MPPED1O15442 326 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 ST8SIA3O43173 380 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 ZNF205O95201 554 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 DIRAS3O95661 229 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 CDS2O95674 445 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 CELA3AP09093 270 aa12.22□□□□□ -0.45
ABCB1-207ENST00000488737 RNPS1Q15287 305 aaKnown RBP12.22□□□□□ -0.45
ABCB1-207ENST00000488737 SWI5Q1ZZU3 235 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms