RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 KCTD14Q9BQ13 255 aaPredicted RBP7.2□□□□□ -1.26
COL17A1-207ENST00000488320 SIKE1Q9BRV8 207 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 PKIBQ9C010 78 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 PBOV1Q9GZY1 135 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 ABCG5Q9H222 651 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 C19orf73Q9NVV2 129 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 CHCHD3Q9NX63 227 aaKnown RBP7.2□□□□□ -1.26
COL17A1-207ENST00000488320 TAS2R3Q9NYW6 316 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 LAMP5Q9UJQ1 280 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 SLC7A11Q9UPY5 501 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 BAIAP2Q9UQB8 552 aa7.2□□□□□ -1.26
COL17A1-207ENST00000488320 KMT2AQ03164 3969 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 NME4O00746 187 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 PSPNO60542 156 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 SELENOFO60613 162 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 DHRS3O75911 302 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 IGHG4P01861 327 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 ARSBP15848 533 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 PTGFRP43088 359 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 RAB7AP51149 207 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 SNU13P55769 128 aaKnown RBP7.19□□□□□ -1.26
COL17A1-207ENST00000488320 ISL1P61371 349 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 HAGHQ16775 308 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 FAM53AQ6NSI3 398 aaPredicted RBP7.19□□□□□ -1.26
COL17A1-207ENST00000488320 RASSF6Q6ZTQ3 369 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 MOB3BQ86TA1 216 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 LYPD6Q86Y78 171 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 TGIF2LXQ8IUE1 241 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 OR9G1Q8NH87 305 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 CORO2AQ92828 525 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 OR4C12Q96R67 309 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 TEAD3Q99594 435 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 HOPXQ9BPY8 73 aaPredicted RBP7.19□□□□□ -1.26
COL17A1-207ENST00000488320 CADM1Q9BY67 442 aaKnown RBP7.19□□□□□ -1.26
COL17A1-207ENST00000488320 TUBA4BQ9H853 241 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 GNB4Q9HAV0 340 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 ING3Q9NXR8 418 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 MTCH1Q9NZJ7 389 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 GTF2A1LQ9UNN4 478 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 VSIG4Q9Y279 399 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 U3KQV3 271 aa7.19□□□□□ -1.26
COL17A1-207ENST00000488320 J3QR06 171 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 SIRPB1O00241 398 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 NDUFAB1O14561 156 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 MPZL2O60487 215 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 GASTP01350 101 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 IGHV3-7P01780 117 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 CALCBP10092 127 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 MTNR1BP49286 362 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 GNB1P62873 340 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 AESQ08117 197 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 SF3A3Q12874 501 aaKnown RBP eCLIP7.18□□□□□ -1.26
COL17A1-207ENST00000488320 BNIP1Q12981 228 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 ASPHD1Q5U4P2 390 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 CATSPERDQ86XM0 798 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 OR8H3Q8N146 312 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 Q8N1Y9 231 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 RNF148Q8N7C7 305 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 ZNF491Q8N8L2 437 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 OR9Q2Q8NGE9 314 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 DLX4Q92988 240 aaPredicted RBP7.18□□□□□ -1.26
COL17A1-207ENST00000488320 PYURFQ96I23 114 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 UBE2E2Q96LR5 201 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 KCTD7Q96MP8 289 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 MROQ9BYG7 248 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 LIN7CQ9NUP9 197 aaKnown RBP7.18□□□□□ -1.26
COL17A1-207ENST00000488320 INTS9Q9NV88 658 aaKnown RBP7.18□□□□□ -1.26
COL17A1-207ENST00000488320 ARMC1Q9NVT9 282 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 FAM206AQ9NX38 181 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 DNAJB9Q9UBS3 223 aa7.18□□□□□ -1.26
COL17A1-207ENST00000488320 A0A1W2PPI3 338 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 MAGEA13PA6NCF6 341 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 A8MZ25 164 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 I3L521 148 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 SH2D1BO14796 132 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 SOX14O95416 240 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 CYB5AP00167 134 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 FABP3P05413 133 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 OR8U9P0C7N5 309 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 OR5H8P0DN80 308 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 PRKACAP17612 351 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 CNTFRP26992 372 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 PSMB8P28062 276 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 OR3A1P47881 315 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 GLIPR1P48060 266 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 HCCSP53701 268 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 SLURP1P55000 103 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 PITPNAQ00169 270 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 ZNF91Q05481 1191 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 SCN1BQ07699 218 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 MADCAM1Q13477 382 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 DIAPH2-AS1Q14236 149 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 TMEM42Q69YG0 159 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 ACSM6Q6P461 480 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 SLC25A26Q70HW3 274 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 Q8IYB0 196 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 FAM58AQ8N1B3 248 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 FAM71E2Q8N5Q1 922 aa7.17□□□□□ -1.26
COL17A1-207ENST00000488320 OR10X1Q8NGY0 326 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms