RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 C7orf69Q9H7B7 122 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 MMP26Q9NRE1 261 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 ST3GAL6Q9Y274 331 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 POLR3KQ9Y2Y1 108 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-219ENST00000488186 WNK2Q9Y3S1 2297 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 IGHV2-70DA0A0C4DH43 119 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 A0A1W2PQ09 198 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 J3QLI3 93 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 AIREO43918 545 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 OR2H2O95918 312 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 TK1P04183 234 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 LIPFP07098 398 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 SMIM18P0DKX4 95 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 PDCD1Q15116 288 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 CR1LQ2VPA4 569 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 C1orf100Q5SVJ3 147 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 GDPGP1Q6ZNW5 385 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 CHST4Q8NCG5 386 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 BEX2Q9BXY8 128 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 FAM234AQ9H0X4 552 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 SEBOXQ9HB31 216 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-219ENST00000488186 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
C9orf3-219ENST00000488186 KIR2DS1A0A191URI9 304 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 INAFM1C9JVW0 142 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 K7N7A8 449 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 SLC17A2O00624 439 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 PPIAL4GP0DN37 164 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 ARSBP15848 533 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 P2RY14Q15391 338 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 GRK1Q15835 563 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 PIGYQ3MUY2 71 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 LINC00596Q86U02 117 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 TPRA1Q86W33 373 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 FGFRL1Q8N441 504 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 TEX29Q8N6K0 151 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 Q8NFD4 153 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 OR51T1Q8NGJ9 327 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 MRPS24Q96EL2 167 aaKnown RBP13.04□□□□□ -0.32
C9orf3-219ENST00000488186 DCTN5Q9BTE1 182 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 SELENOIQ9C0D9 397 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 CHST6Q9GZX3 395 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 BANF2Q9H503 90 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 RPUSD1Q9UJJ7 312 aaKnown RBP13.04□□□□□ -0.32
C9orf3-219ENST00000488186 AUP1Q9Y679 476 aa13.04□□□□□ -0.32
C9orf3-219ENST00000488186 ANK3Q12955 4377 aaKnown RBP13.04□□□□□ -0.32
C9orf3-219ENST00000488186 A0A1W2PPH5 198 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 FUOMA2VDF0 154 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 C22orf46C9J442 243 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 SLC22A1O15245 554 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 OR7C1O76099 320 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-219ENST00000488186 BPNT1O95861 308 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 MPIG6BO95866 241 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 MGMTP16455 207 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 SRP14P37108 136 aaKnown RBP13.03□□□□□ -0.32
C9orf3-219ENST00000488186 EDDM3BP56851 147 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 RBM11P57052 281 aaKnown RBP13.03□□□□□ -0.32
C9orf3-219ENST00000488186 LSM3P62310 102 aaKnown RBP13.03□□□□□ -0.32
C9orf3-219ENST00000488186 EDDM3AQ14507 147 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 FAM120AOSQ5T036 256 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 HES5Q5TA89 166 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 GPR141Q7Z602 305 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 LYPD6Q86Y78 171 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 OR4M1Q8NGD0 313 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 KCNG3Q8TAE7 436 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 FAM46BQ96A09 425 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 ONECUT1Q9UBC0 465 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 LPAR3Q9UBY5 353 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 SCOCQ9UIL1 159 aa13.03□□□□□ -0.32
C9orf3-219ENST00000488186 TRBV23-1A0A0A0MS06 115 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 A0A0G2JK05 382 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 A0A1W2PP11 408 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 TMEM82A0PJX8 343 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 H3BUI4 141 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 MGST3O14880 152 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 GEMIN2O14893 280 aaKnown RBP13.02□□□□□ -0.33
C9orf3-219ENST00000488186 SDC2P34741 201 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 RPL31P62899 125 aaKnown RBP13.02□□□□□ -0.33
C9orf3-219ENST00000488186 MXD1Q05195 221 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 BLMHQ13867 455 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 TAF9Q16594 264 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 MPV17LQ2QL34 196 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 PAN3Q58A45 887 aaKnown RBP13.02□□□□□ -0.33
C9orf3-219ENST00000488186 NHLRC3Q5JS37 347 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 METTL11BQ5VVY1 283 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 Q6P435 159 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 CMTM4Q8IZR5 234 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 OR8H2Q8N162 312 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 OR13F1Q8NGS4 319 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 GFI1Q99684 422 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 CENPOQ9BU64 300 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 FUNDC2Q9BWH2 189 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 STEAP1Q9UHE8 339 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 CDC42EP3Q9UKI2 254 aa13.02□□□□□ -0.33
C9orf3-219ENST00000488186 SMIM30A4D0T7 59 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 HSPB6O14558 160 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms