RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 NEURL4Q96JN8 1562 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 MIA3Q5JRA6 1907 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 CCNB3Q8WWL7 1395 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ANKRD30AQ9BXX3 1397 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 JCADQ9P266 1359 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 PLXND1Q9Y4D7 1925 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 IGHV2OR16-5A0A0B4J2B6 119 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 LOC100653049A0A140TA62 436 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 A0A1B0GTQ1 180 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ERICH2A1L162 156 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 C3orf84H3BNL1 204 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 H3BQV1 296 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 C15orf65H3BRN8 121 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 NDUFS8O00217 210 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 SULT1B1O43704 296 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 DHRS3O75911 302 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 KRT34O76011 436 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 GCGP01275 180 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 IGHMP01871 453 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 STAG3L3P0CL85 134 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 CBR1P16152 277 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 PRKACAP17612 351 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 GTF2H1P32780 548 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 CFHR2P36980 270 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ERFP50548 548 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 GZMMP51124 257 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 MRPS15P82914 257 aaKnown RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 ALX1Q15699 326 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 NDUFA5Q16718 116 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 KRTAP25-1Q3LHN0 102 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 CDKL4Q5MAI5 379 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 CLVS2Q5SYC1 327 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 C6orf183Q5T699 404 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 PDPK2PQ6A1A2 396 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 AMMECR1LQ6DCA0 310 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ZNF470Q6ECI4 717 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 LRRC6Q86X45 466 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 CLVS1Q8IUQ0 354 aaPredicted RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 LINC00337Q8N6G1 96 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ZDHHC22Q8N966 263 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 PROKR2Q8NFJ6 384 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 UBA3Q8TBC4 463 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 DDI1Q8WTU0 396 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ORAOV1Q8WV07 137 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 TFGQ92734 400 aaPredicted RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 KIAA1143Q96AT1 154 aaPredicted RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 RAD51AP1Q96B01 352 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 OPTNQ96CV9 577 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 OTUB2Q96DC9 234 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 RNF170Q96K19 258 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ATP6V1G3Q96LB4 118 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 PPP1R36Q96LQ0 422 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 IGF2BP2-AS1Q96M15 143 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 PEBP4Q96S96 227 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ZNF649Q9BS31 505 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 BBS2Q9BXC9 721 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 BCL2L14Q9BZR8 327 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ARMC7Q9H6L4 198 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 LRRC19Q9H756 370 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 RPRD1BQ9NQG5 326 aaKnown RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 EURLQ9NYK6 297 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 SLC22A14Q9Y267 594 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 FAM32AQ9Y421 112 aaKnown RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 KLF12Q9Y4X4 402 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 KNDC1Q76NI1 1749 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ABCA3Q99758 1704 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 ABCA5Q8WWZ7 1642 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 MIA2Q96PC5 1412 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 PPLO60437 1756 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 N4BP2Q86UW6 1770 aaPredicted RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 CCDC171Q6TFL3 1326 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 NRCAMQ92823 1304 aa0.88□□□□□ -2.27
SMC4-220ENST00000488017 KDM5AP29375 1690 aaKnown RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 PPRC1Q5VV67 1664 aaKnown RBP0.88□□□□□ -2.27
SMC4-220ENST00000488017 BICRAQ9NZM4 1560 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 RAPGEF2Q9Y4G8 1499 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ANKRD26Q9UPS8 1709 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ADCY9O60503 1353 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 KIF24Q5T7B8 1368 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TMEM131LA2VDJ0 1609 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 MROH1Q8NDA8 1641 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 FUOMA2VDF0 154 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 GOLGA6L4A6NEF3 574 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 LINC00587B1AMM8 73 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 IGLL5B9A064 214 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 HSBP1L1C9JCN9 74 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 E7EQL1 145 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 F8VP50 259 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 H3BQ85 93 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 GOLGA8RI6L899 631 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 LIN7AO14910 233 aaPredicted RBP0.87□□□□□ -2.27
SMC4-220ENST00000488017 BIRC5O15392 142 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 AQP9O43315 295 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CYTH3O43739 400 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 ENTPD6O75354 484 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 CPSF4O95639 269 aaKnown RBP0.87□□□□□ -2.27
SMC4-220ENST00000488017 CXorf1O96002 111 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 TRGV3P03979 118 aa0.87□□□□□ -2.27
SMC4-220ENST00000488017 S100A9P06702 114 aaKnown RBP0.87□□□□□ -2.27
SMC4-220ENST00000488017 KLK1P06870 262 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms