RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PTGES3Q15185 160 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 TPTE2P1Q5T6R2 138 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 FAHD1Q6P587 224 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 HEPN1Q6WQI6 88 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 C18orf65Q6ZTR6 163 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 MEPCEQ7L2J0 689 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 ZNF329Q86UD4 541 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 Q8IYB0 196 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 FAM58AQ8N1B3 248 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 ZNF286AQ9HBT8 521 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 CLN6Q9NWW5 311 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 ENOPH1Q9UHY7 261 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 POMPQ9Y244 141 aa15.42■□□□□ 0.06
SMPDL3A-202ENST00000487215 TRGV10A0A0A0MS01 117 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 TRBV2A0A0J9YWF9 115 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 M0R129 80 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 SYT7O43581 403 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 ENTPD6O75354 484 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 CALCBP10092 127 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 BCL3P20749 454 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 CD34P28906 385 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 CEACAM3P40198 252 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 ZNF146Q15072 292 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 HLA-DRB5Q30154 266 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 C8orf86Q6ZUL3 223 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 SSX6Q7RTT6 188 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 OR2W3Q7Z3T1 314 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 MOB4Q9Y3A3 225 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 PCDHGB5Q9Y5G0 923 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 HSPE1-MOB4S4R3N1 261 aa15.41■□□□□ 0.06
SMPDL3A-202ENST00000487215 H0YHG0 523 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 LY6LH3BQJ8 138 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 BUB1B-PAK6H3BSN5 160 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 SIRPB1O00241 398 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 NHLRC4P0CG21 123 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 PRKACAP17612 351 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 SPIN3Q5JUX0 258 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 AADACL4Q5VUY2 407 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 NXNL2Q5VZ03 156 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 CATSPERDQ86XM0 798 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 CORO2AQ92828 525 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 CREB3L1Q96BA8 519 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 TAS2R3Q9NYW6 316 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 GLS2Q9UI32 602 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 U3KQK5 164 aa15.4■□□□□ 0.06
SMPDL3A-202ENST00000487215 TOR1AO14656 332 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 KRT8P05787 483 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 MYCNOSP40205 109 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 MNDAP41218 407 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 OR3A4PP47883 348 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 POU3F4P49335 361 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 DAPP51397 102 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 CDC42P60953 191 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 DGCR2P98153 550 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 UNQ9370/PRO34162Q6UXP9 181 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 YIPF7Q8N8F6 280 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 TFAP2CQ92754 450 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 P2RX4Q99571 388 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 KRT84Q9NSB2 600 aa15.39■□□□□ 0.05
SMPDL3A-202ENST00000487215 NUDT19A8MXV4 375 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 OOSP1A8MZH6 123 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 G3V2T6 193 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 OR2H2O95918 312 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 CYB5AP00167 134 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 SERPINA3P01011 423 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 GLIPR1P48060 266 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 RBP2P50120 134 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 ATP1B3P54709 279 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 AESQ08117 197 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 UTF1Q5T230 341 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 CCDC144NLQ6NUI1 221 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 GID4Q8IVV7 300 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 DNAAF1Q8NEP3 725 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 UTP4Q969X6 686 aaKnown RBP15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 NOL4LQ96MY1 436 aaPredicted RBP15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 TBX5Q99593 518 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 HMG20AQ9NP66 347 aa15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 EXOSC4Q9NPD3 245 aaKnown RBP15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 ZMAT5Q9UDW3 170 aaKnown RBP15.38■□□□□ 0.05
SMPDL3A-202ENST00000487215 RYR2Q92736 4967 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 A0A087X0M5 115 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 IGKV1-9A0A0C4DH69 117 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 A0A1B0GX30 115 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 FUOMA2VDF0 154 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM106CPP0CH98 169 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 LMO1P25800 156 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 SLC6A1P30531 599 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 PTGFRP43088 359 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 RBM39Q14498 530 aaKnown RBP15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 KPNB1Q14974 876 aaKnown RBP15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 TCEANCQ8N8B7 351 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 KLHL30-AS1Q8NEE0 82 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 CCDC54Q8NEL0 328 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 TMEM163Q8TC26 289 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 CHPT1Q8WUD6 406 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 SLC7A6OSQ96CW6 309 aaPredicted RBP15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 ADI1Q9BV57 179 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 ZFP57Q9NU63 452 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 GSTK1Q9Y2Q3 226 aa15.37■□□□□ 0.05
SMPDL3A-202ENST00000487215 FAM90A18PA6NE21 464 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms