RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 EVI2BP34910 448 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 IFNGR2P38484 337 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 MDH2P40926 338 aaKnown RBP3.03□□□□□ -1.92
PTCD3-216ENST00000487043 PTGDSP41222 190 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 RBM34P42696 430 aaKnown RBP3.03□□□□□ -1.92
PTCD3-216ENST00000487043 GSSP48637 474 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 IDH2P48735 452 aaKnown RBP3.03□□□□□ -1.92
PTCD3-216ENST00000487043 CYB561P49447 251 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 SSR4P51571 173 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 P2RX1P51575 399 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 FBXW4P57775 412 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 PLP1P60201 277 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 LMO4P61968 165 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF117Q03924 483 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 PRKCDQ05655 676 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 SKP2Q13309 424 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 MED21Q13503 144 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 AANATQ16613 207 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 Q1RN00 199 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 GSG1Q2KHT4 349 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 C6orf52Q5T4I8 152 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 OR2G6Q5TZ20 316 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 METTL11BQ5VVY1 283 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 ACOT7LQ6ZUV0 252 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 MBOAT2Q6ZWT7 520 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 NKAIN4Q8IVV8 208 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 GATSQ8NAP1 163 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 OR4K5Q8NGD3 323 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 OR5W2Q8NH69 310 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 GNPDA2Q8TDQ7 276 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 GPR119Q8TDV5 335 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 ACOT11Q8WXI4 607 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-216ENST00000487043 SLC25A38Q96DW6 304 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 VSIG2Q96IQ7 327 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 SEC22AQ96IW7 307 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 PLEKHA8Q96JA3 519 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 PGLYRP4Q96LB8 373 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 CNN2Q99439 309 aaKnown RBP3.03□□□□□ -1.92
PTCD3-216ENST00000487043 NIPSNAP1Q9BPW8 284 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 KLHDC3Q9BQ90 382 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF426Q9BUY5 554 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 ANGPTL4Q9BY76 406 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 SRXN1Q9BYN0 137 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 TBL1XR1Q9BZK7 514 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 Q9H521 79 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 NARFLQ9H6Q4 476 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 C12orf10Q9HB07 376 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 SH2D2AQ9NP31 389 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 CTPS2Q9NRF8 586 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 RPS6KB2Q9UBS0 482 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 ENOPH1Q9UHY7 261 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 POFUT2Q9Y2G5 429 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 KCNIP3Q9Y2W7 256 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 RPL36Q9Y3U8 105 aaKnown RBP3.03□□□□□ -1.92
PTCD3-216ENST00000487043 FLVCR1Q9Y5Y0 555 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 PEX16Q9Y5Y5 336 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 CHCHD2Q9Y6H1 151 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-216ENST00000487043 SPEGQ15772 3267 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 AHCTF1Q8WYP5 2266 aa3.03□□□□□ -1.92
PTCD3-216ENST00000487043 EXPH5Q8NEV8 1989 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 A0A1B0GU03 582 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 LOC100130705A0A1B0GUX0 176 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 SMIM31A0A1B0GVY4 71 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 SERTM2A0A1B0GWG4 89 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 TUBAL3A6NHL2 446 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ARGFXA6NJG6 315 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 CDC40O60508 579 aaKnown RBP eCLIP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 PFDN1O60925 122 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 CBR3O75828 277 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 TMEM50AO95807 157 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 IGF2P01344 180 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 IFI30P13284 250 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 CNR1P21554 472 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 CXCR1P25024 350 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 POLR2IP36954 125 aaKnown RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 DDOSTP39656 456 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 CRYBB2P43320 205 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 OMPP47874 163 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 OR3A4PP47883 348 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 CRISP1P54107 249 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 UGT2B15P54855 530 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 CTBP2P56545 445 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ESRRGP62508 458 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 SCRN3Q0VDG4 424 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 TSPAN31Q12999 210 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 SRSF6Q13247 344 aaKnown RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ARL6IP1Q15041 203 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 PTGES3Q15185 160 aaKnown RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 TOMM34Q15785 309 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 NDUFAF6Q330K2 333 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 NSUN5P1Q3KNT7 163 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 C1orf185Q5T7R7 199 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 RNLSQ5VYX0 342 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 TTC33Q6PID6 262 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 RTL4Q6ZR62 310 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 RASSF6Q6ZTQ3 369 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 GRINAQ7Z429 371 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 PLCZ1Q86YW0 608 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms