RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NUDT22Q9BRQ3 303 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 CTDSP1Q9GZU7 261 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 HIPK2Q9H2X6 1198 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 NKX2-4Q9H2Z4 354 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 LYRM2Q9NU23 88 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 CISD1Q9NZ45 108 aaKnown RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 LRFN1Q9P244 771 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 ADAMTS9Q9P2N4 1935 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 CCDC163A0A0D9SF12 145 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 RER1O15258 196 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TSPAN2O60636 221 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 APODP05090 189 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 CEACAM1P13688 526 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 ELLP55199 621 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-208ENST00000486641 ERVS71-1P61550 626 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 DCAF7P61962 342 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 GAGE1Q13065 139 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 MFAP5Q13361 173 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 CXorf66Q5JRM2 361 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-208ENST00000486641 C1orf194Q5T5A4 169 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 NCR3LG1Q68D85 454 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF776Q68DI1 518 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-208ENST00000486641 PRR18Q8N4B5 295 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 PYGO2Q9BRQ0 406 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 OPN3Q9H1Y3 402 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-208ENST00000486641 GPR173Q9NS66 373 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 P4HTMQ9NXG6 502 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 LAMP3Q9UQV4 416 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 POLR1DQ9Y2S0 133 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 A0A1W2PQD3 144 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TMEM210A6NLX4 147 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TOX3O15405 576 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TMEM50AO95807 157 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TUBG1P23258 451 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TLE3Q04726 772 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 PRSS8Q16651 343 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 CLEC12BQ2HXU8 276 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF774Q6NX45 483 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 ARMC6Q6NXE6 501 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 C16orf82Q7Z2V1 217 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TMEM37Q8WXS4 190 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TMEM18Q96B42 140 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 ACY3Q96HD9 319 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 LYZL4Q96KX0 146 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TPSD1Q9BZJ3 242 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF665Q9H7R5 613 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TBX21Q9UL17 535 aa9.25□□□□□ -0.93
CCDC171-208ENST00000486641 POLR3KQ9Y2Y1 108 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-208ENST00000486641 MRPS18CQ9Y3D5 142 aaKnown RBP9.25□□□□□ -0.93
CCDC171-208ENST00000486641 TRAV1-1A0A0B4J248 108 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 SLC33A1O00400 549 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-208ENST00000486641 SCGB1D1O95968 90 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 CRYABP02511 175 aaKnown RBP9.24□□□□□ -0.93
CCDC171-208ENST00000486641 RPLP1P05386 114 aaKnown RBP9.24□□□□□ -0.93
CCDC171-208ENST00000486641 HNRNPA1P09651 372 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC171-208ENST00000486641 THEGLP0DJG4 465 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 BCL2P10415 239 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 OR3A1P47881 315 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 OR1D4P47884 311 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 RPL29P47914 159 aaKnown RBP9.24□□□□□ -0.93
CCDC171-208ENST00000486641 GNB2P62879 340 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 VAMP2P63027 116 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 MRPS11P82912 194 aaKnown RBP9.24□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF154Q13106 437 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 DPPA3Q6W0C5 159 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 DTX1Q86Y01 620 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF100Q8IYN0 542 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF283Q8N7M2 679 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 C12orf76Q8N812 135 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-208ENST00000486641 ADAMTS18Q8TE60 1221 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF721Q8TF20 911 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 DYRK2Q92630 601 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 PIGTQ969N2 578 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 WFIKKN1Q96NZ8 548 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 ANGPTL4Q9BY76 406 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 SEMA5BQ9P283 1151 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 V9GYS6 101 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 ATG2AQ2TAZ0 1938 aa9.24□□□□□ -0.93
CCDC171-208ENST00000486641 C2orf72A6NCS6 295 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 TRDCB7Z8K6 153 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 CST2P09228 141 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 TAS2R30P59541 319 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 GABREP78334 506 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 H1FOOQ8IZA3 346 aaPredicted RBP9.23□□□□□ -0.93
CCDC171-208ENST00000486641 DTD1Q8TEA8 209 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 SLC37A2Q8TED4 501 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 TMEM170AQ8WVE7 144 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 TSLPQ969D9 159 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 Q96M66 194 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 PNRC2Q9NPJ4 139 aaKnown RBP9.23□□□□□ -0.93
CCDC171-208ENST00000486641 CHD7Q9P2D1 2997 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 C3orf85A0A1B0GTC6 90 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 B4E171 279 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 NXPH3O95157 252 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 CDS2O95674 445 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 DDAH2O95865 285 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 IGKV3-11P04433 115 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 LINC00614P0C842 121 aa9.23□□□□□ -0.93
CCDC171-208ENST00000486641 ACRP10323 421 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms