RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 FTMTQ8N4E7 242 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 TMEM229BQ8NBD8 167 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 CSNK2A3Q8NEV1 391 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 OR56B1Q8NGI3 324 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 OR5L1Q8NGL2 311 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 OR1J1Q8NGS3 322 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 OR56B4Q8NH76 319 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 C22orf15Q8WYQ4 148 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 TAF15Q92804 592 aaKnown RBP eCLIP7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 GPER1Q99527 375 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 S100A13Q99584 98 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 TMPRSS13Q9BYE2 586 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 MMP28Q9H239 520 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 HRASLSQ9HDD0 168 aa7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 FBXO9Q9UK97 447 aaPredicted RBP7.9□□□□□ -1.14
TMEM39A-208ENST00000486159 IGKV1-9A0A0C4DH69 117 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 ZNF816-ZNF321PA0A0X1KG74 233 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 ZSCAN5BA6NJL1 495 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 RAB27BO00194 218 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 CA11O75493 328 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 IGHV1-46P01743 117 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 AKAIN1P0CW23 69 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 FAHP16930 419 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 TBPP20226 339 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 TUBG1P23258 451 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 STOMP27105 288 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 BTCP35070 178 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 RCVRNP35243 200 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 APLNRP35414 380 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 CBX5P45973 191 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 FUT6P51993 359 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 TAS2R19P59542 299 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 RPS23P62266 143 aaKnown RBP7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 TATDN3Q17R31 274 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 TBC1D28Q2M2D7 210 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 GFOD2Q3B7J2 385 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 GLIPR1L1Q6UWM5 242 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 RFPL4BQ6ZWI9 263 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 DTX3Q8N9I9 347 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 OR10R2Q8NGX6 335 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 SLC25A40Q8TBP6 338 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 AQP3Q92482 292 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 SLC7A6Q92536 515 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 MRPS24Q96EL2 167 aaKnown RBP7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 MARS2Q96GW9 593 aaKnown RBP7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 MED30Q96HR3 178 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 POM121L2Q96KW2 1035 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 TMEM59Q9BXS4 323 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 OR2J1Q9GZK6 312 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 ZNF665Q9H7R5 613 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 ESM1Q9NQ30 184 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 TUBG2Q9NRH3 451 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 SLC7A11Q9UPY5 501 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 WIPI2Q9Y4P8 454 aa7.89□□□□□ -1.15
TMEM39A-208ENST00000486159 IGHV1-69-2A0A0G2JMI3 117 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 C7orf66A4D0T2 115 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 C5orf49A4QMS7 147 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 H3BUI4 141 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 TPD52L2O43399 206 aaKnown RBP7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 AKR7A2O43488 359 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 GMDSO60547 372 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 ICMTO60725 284 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 CCNKO75909 580 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 NRASP01111 189 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 IGHV3-13P01766 116 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 IGHV2-5P01817 119 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 H2AFB2P0C5Z0 115 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 ZFP36P26651 326 aaKnown RBP7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 SRP9P49458 86 aaKnown RBP7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 RBP2P50120 134 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 ATP1B3P54709 279 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 FAM3AP98173 230 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 UNC119Q13432 240 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 MEF2DQ14814 521 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 ZMYND11Q15326 602 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 UBE2V2Q15819 145 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 PCGF3Q3KNV8 242 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 ZNF260Q3ZCT1 412 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 UNQ6126/PRO20091Q6UXV3 157 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 C12orf54Q6X4T0 127 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 ASCL4Q6XD76 172 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 PEG10Q86TG7 708 aaKnown RBP7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 C1orf174Q8IYL3 243 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 FAM89BQ8N5H3 189 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 ZSCAN4Q8NAM6 433 aaPredicted RBP7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 PXT1Q8NFP0 134 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 OR51F2Q8NH61 342 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 CCL17Q92583 94 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 UPRTQ96BW1 309 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 SEH1LQ96EE3 360 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 C1orf147Q96MC9 270 aaPredicted RBP7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 SLC6A7Q99884 636 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 TM2D1Q9BX74 207 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 MSL2Q9HCI7 577 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 IL36GQ9NZH8 169 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 KLK11Q9UBX7 282 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 OPN4Q9UHM6 478 aa7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 SOX21Q9Y651 276 aaPredicted RBP7.88□□□□□ -1.15
TMEM39A-208ENST00000486159 C5orf63A6NC05 138 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms