RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TAS2R5Q9NYW4 299 aa2.84□□□□□ -1.95
VPS13A-211ENST00000484581 NAGKQ9UJ70 344 aa2.84□□□□□ -1.95
VPS13A-211ENST00000484581 YTHDF2Q9Y5A9 579 aaKnown RBP2.84□□□□□ -1.95
VPS13A-211ENST00000484581 IGSF9BQ9UPX0 1349 aa2.84□□□□□ -1.96
VPS13A-211ENST00000484581 SETD1AO15047 1707 aaKnown RBP2.84□□□□□ -1.96
VPS13A-211ENST00000484581 IGHV1-3A0A0C4DH29 117 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 MYBPHLA2RUH7 354 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 PGPA6NDG6 321 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 CD300LBA8K4G0 201 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 A8MWL6 223 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 GOLGA8KD6RF30 607 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 GOLGA8MH3BSY2 632 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 GYG2O15488 501 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 PDCD6O75340 191 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 CYB5R3P00387 301 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-211ENST00000484581 LINC00869P0C866 280 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 HIST1H1CP16403 213 aaKnown RBP2.83□□□□□ -1.96
VPS13A-211ENST00000484581 ATF1P18846 271 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 PRTN3P24158 256 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 ELK4P28324 431 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 MAGEA2P43356 314 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 CDC34P49427 236 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-211ENST00000484581 DMC1Q14565 340 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 FAM162BQ5T6X4 162 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 IGFL2Q6UWQ7 119 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 DGAT2L6Q6ZPD8 337 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 DNAAF3Q8N9W5 541 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 ZNF555Q8NEP9 628 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 OR9A2Q8NGT5 310 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 UBALD1Q8TB05 177 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 RBMXL1Q96E39 390 aaKnown RBP2.83□□□□□ -1.96
VPS13A-211ENST00000484581 SLC25A31Q9H0C2 315 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 POMKQ9H5K3 350 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 SND1-IT1Q9HBX3 110 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 RBM12B-AS1Q9P1G2 102 aa2.83□□□□□ -1.96
VPS13A-211ENST00000484581 NUP153P49790 1475 aaKnown RBP2.83□□□□□ -1.96
VPS13A-211ENST00000484581 MYO10Q9HD67 2058 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 TRAV8-2A0A0B4J237 113 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 ATP8B1O43520 1251 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 CNMDO75829 334 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 CCNKO75909 580 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 CA2P00918 260 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 HLA-AP01891 365 aaKnown RBP2.82□□□□□ -1.96
VPS13A-211ENST00000484581 PSKH1P11801 424 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 AKR1C4P17516 323 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 FAM3AP98173 230 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 SSX1Q16384 188 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 UBE2NLQ5JXB2 153 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 CDKL4Q5MAI5 379 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 GLYATQ6IB77 296 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 MORN3Q6PF18 240 aaPredicted RBP2.82□□□□□ -1.96
VPS13A-211ENST00000484581 PDPNQ86YL7 162 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 Q8N7P7 452 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 Q8N9L7 120 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 FAM57AQ8TBR7 257 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 CMTM5Q96DZ9 223 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 GPR22Q99680 433 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 RNF5Q99942 180 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 SPZ1Q9BXG8 430 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 POTEKPQ9BYX7 375 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 SLC19A3Q9BZV2 496 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 VCXQ9H320 206 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 METTL17Q9H7H0 456 aaPredicted RBP2.82□□□□□ -1.96
VPS13A-211ENST00000484581 SPANXB1Q9NS25 103 aaPredicted RBP2.82□□□□□ -1.96
VPS13A-211ENST00000484581 PLEKHJ1Q9NW61 149 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 CBY1Q9Y3M2 126 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 RFNGQ9Y644 331 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 ADCY9O60503 1353 aa2.82□□□□□ -1.96
VPS13A-211ENST00000484581 TRAV8-3A0A0A6YYJ7 113 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 IGKV1-6A0A0C4DH72 117 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 CEACAM18A8MTB9 384 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 EFCAB9A8MZ26 197 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 H3BP45 60 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 GPR171O14626 319 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 BET1O15155 118 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 HPGDSO60760 199 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 MED6O75586 246 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 IGKV1-39P01597 117 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 IGKV1D-39P04432 117 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 SPNP16150 400 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 F8A1P23610 371 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 HLA-DMAP28067 261 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 PSMD7P51665 324 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 CMC4P56277 68 aaPredicted RBP2.81□□□□□ -1.96
VPS13A-211ENST00000484581 ELF3P78545 371 aaPredicted RBP2.81□□□□□ -1.96
VPS13A-211ENST00000484581 ATP5G2Q06055 141 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 CDC20Q12834 499 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 ELOCQ15369 112 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 SLC36A2Q495M3 483 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 Q6P435 159 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
VPS13A-211ENST00000484581 LINC00596Q86U02 117 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 SLC13A5Q86YT5 568 aaPredicted RBP2.81□□□□□ -1.96
VPS13A-211ENST00000484581 ITPRIPQ8IWB1 547 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 ENTHD1Q8IYW4 607 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 ZNF101Q8IZC7 436 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 BLIDQ8IZY5 108 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 TMEM156Q8N614 296 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 TMEM251Q8N6I4 163 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms