RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 LYPD2Q6UXB3 125 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 ZNF841Q6ZN19 808 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 C17orf107Q6ZR85 190 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 BIVMQ86UB2 503 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 ZNF561Q8N587 486 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 FAM89BQ8N5H3 189 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 BOLLQ8N9W6 283 aaKnown RBP5.35□□□□□ -1.55
NCL-209ENST00000484328 CHST4Q8NCG5 386 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 DEFB108BQ8NET1 73 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 ACOT12Q8WYK0 555 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 AP3S1Q92572 193 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 DACT3Q96B18 629 aaPredicted RBP5.35□□□□□ -1.55
NCL-209ENST00000484328 DGCR14Q96DF8 476 aaKnown RBP5.35□□□□□ -1.55
NCL-209ENST00000484328 NEIL1Q96FI4 390 aaPredicted RBP5.35□□□□□ -1.55
NCL-209ENST00000484328 COX4I2Q96KJ9 171 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 Q96MF0 132 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 S100A13Q99584 98 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 GAL3ST1Q99999 423 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 NUDT16L1Q9BRJ7 211 aaKnown RBP5.35□□□□□ -1.55
NCL-209ENST00000484328 TMEM59Q9BXS4 323 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 REG4Q9BYZ8 158 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 SLIRPQ9GZT3 109 aaKnown RBP5.35□□□□□ -1.55
NCL-209ENST00000484328 NXF2Q9GZY0 626 aaKnown RBP5.35□□□□□ -1.55
NCL-209ENST00000484328 FAM234AQ9H0X4 552 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 ZNF665Q9H7R5 613 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 PATZ1Q9HBE1 687 aaKnown RBP5.35□□□□□ -1.55
NCL-209ENST00000484328 ZNF581Q9P0T4 197 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 DUX4Q9UBX2 424 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 MIOXQ9UGB7 285 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 SPATA2Q9UM82 520 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 ING4Q9UNL4 249 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 ST3GAL6Q9Y274 331 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 MAB21L2Q9Y586 359 aa5.35□□□□□ -1.55
NCL-209ENST00000484328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.34□□□□□ -1.551e-10■■■□□ 17.4
NCL-209ENST00000484328 TRAV24A0A0B4J272 114 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 TMEM82A0PJX8 343 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 ISPDA4D126 451 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 K7N7A8 449 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 RAB27BO00194 218 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 SLC33A1O00400 549 aaPredicted RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 GEMIN2O14893 280 aaKnown RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 GPR37O15354 613 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 TMPRSS2O15393 492 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 ADAM20O43506 726 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 PSPNO60542 156 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 MPIG6BO95866 241 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 OR2H2O95918 312 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 TFF1P04155 84 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 TK1P04183 234 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 CHRM2P08172 466 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 SELLP14151 372 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 SNRPBP14678 240 aaKnown RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 RPS2P15880 293 aaKnown RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 ZNF182P17025 639 aaPredicted RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 CHATP28329 748 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 IL2RGP31785 369 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 SOX6P35712 828 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 OR3A1P47881 315 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 NPY4RP50391 375 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 SEC61A1P61619 476 aaKnown RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 PAX2Q02962 417 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 COL10A1Q03692 680 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 IKZF1Q13422 519 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 FAM189A2Q15884 450 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 TAF9Q16594 264 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 IDNKQ5T6J7 187 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 NLRC3Q7RTR2 1065 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 SLC36A1Q7Z2H8 476 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 OR8H2Q8N162 312 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 GAPTQ8N292 157 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 FAM216BQ8N7L0 139 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 OR5T2Q8NGG2 359 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 OR8B3Q8NGG8 313 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 OR5H6Q8NGV6 325 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 FAM46BQ96A09 425 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 RAB39BQ96DA2 213 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 MED30Q96HR3 178 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 CMTM3Q96MX0 182 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 OR8B2Q96RD0 313 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 CCL13Q99616 98 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 NICN1Q9BSH3 213 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 URM1Q9BTM9 101 aaKnown RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 SELENOIQ9C0D9 397 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 SHARPINQ9H0F6 387 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 ABCG5Q9H222 651 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 BANF2Q9H503 90 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 ELL3Q9HB65 397 aaPredicted RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 SPACA1Q9HBV2 294 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.34□□□□□ -1.55
NCL-209ENST00000484328 RHBDL2Q9NX52 303 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 POLR3KQ9Y2Y1 108 aaPredicted RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 A3GALT2U3KPV4 340 aa5.34□□□□□ -1.55
NCL-209ENST00000484328 MAP1AP78559 2803 aaPredicted RBP5.34□□□□□ -1.55
NCL-209ENST00000484328 CELSR1Q9NYQ6 3014 aa5.34□□□□□ -1.56
NCL-209ENST00000484328 ZANQ9Y493 2812 aa5.33□□□□□ -1.56
NCL-209ENST00000484328 A0A075B6Q4 140 aa5.33□□□□□ -1.56
NCL-209ENST00000484328 A0A0A6YYH2 397 aa5.33□□□□□ -1.56
NCL-209ENST00000484328 CCDC160A6NGH7 325 aa5.33□□□□□ -1.56
NCL-209ENST00000484328 A6NJ64 397 aa5.33□□□□□ -1.56
NCL-209ENST00000484328 FAM157AC9JC47 383 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms