RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DDI2Q5TDH0 399 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 MS4A15Q8N5U1 240 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 OR51T1Q8NGJ9 327 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 TNFAIP8L1Q8WVP5 186 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 ORAI1Q96D31 301 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 CNBD2Q96M20 576 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 ZNF184Q99676 751 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-225ENST00000483506 EXOSC4Q9NPD3 245 aaKnown RBP14.75□□□□□ -0.05
HDAC6-225ENST00000483506 NOX4Q9NPH5 578 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 IL36GQ9NZH8 169 aa14.75□□□□□ -0.05
HDAC6-225ENST00000483506 PIN1P1O15428 100 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 OR2H2O95918 312 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 CALCBP10092 127 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 MAPK3P27361 379 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-225ENST00000483506 DUSP1P28562 367 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 ERP29P30040 261 aaKnown RBP14.74□□□□□ -0.05
HDAC6-225ENST00000483506 ZNF93P35789 620 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-225ENST00000483506 PTGFRP43088 359 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 OR3A1P47881 315 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 DLX6P56179 175 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 MEF2CQ06413 473 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-225ENST00000483506 ZNF273Q14593 569 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 HCP5Q6MZN7 132 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 Q6P435 159 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 GDPD3Q7L5L3 318 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 TCF23Q7RTU1 214 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 SATL1Q86VE3 508 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 CDH26Q8IXH8 852 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-225ENST00000483506 CHST4Q8NCG5 386 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 OR4M1Q8NGD0 313 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 PPP1R35Q8TAP8 253 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 GPER1Q99527 375 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 ISYNA1Q9NPH2 558 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 BLOC1S6Q9UL45 172 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 GSTK1Q9Y2Q3 226 aa14.74□□□□□ -0.05
HDAC6-225ENST00000483506 MDFIC2A0A1B0GVS7 189 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 MAGEA13PA6NCF6 341 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 C17orf98A8MV24 154 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 MGST3O14880 152 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 SC5DO75845 299 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 RBP4P02753 201 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 CSN2P05814 226 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 GABRR1P24046 479 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 TGFBR2P37173 567 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 OR3A4PP47883 348 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 UBE2E1P51965 193 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 BAMBIQ13145 260 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 IL13RA2Q14627 380 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 MED22Q15528 200 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 GRK1Q15835 563 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 NHLRC3Q5JS37 347 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 UNQ9370/PRO34162Q6UXP9 181 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 Q6YL49 198 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 LYPD6Q86Y78 171 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 OR4S1Q8NGB4 309 aa14.73□□□□□ -0.05
HDAC6-225ENST00000483506 RRP15Q9Y3B9 282 aaKnown RBP14.73□□□□□ -0.05
HDAC6-225ENST00000483506 hCG_1809904A0A1W2PP81 198 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 A0A1W2PPE2 198 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 A0A1W2PR64 198 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 A0A1W2PRV1 198 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 DENRO43583 198 aaKnown RBP14.72□□□□□ -0.05
HDAC6-225ENST00000483506 RNASE1P07998 156 aaKnown RBP14.72□□□□□ -0.05
HDAC6-225ENST00000483506 SNU13P55769 128 aaKnown RBP14.72□□□□□ -0.05
HDAC6-225ENST00000483506 DLX1P56177 255 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 KLRD1Q13241 179 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 TPBGQ13641 420 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 SLC9A3R2Q15599 337 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 LDLRAD3Q86YD5 345 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 TMEM86BQ8N661 226 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 CHST6Q9GZX3 395 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 LINC00312Q9Y6C7 94 aa14.72□□□□□ -0.05
HDAC6-225ENST00000483506 A0A0G2JK05 382 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 A0A0U1RQK1 487 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 hADV38S2A0JD32 116 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 SIRPB1O00241 398 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 SLC33A1O00400 549 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-225ENST00000483506 NPFFO15130 113 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 ZNF728P0DKX0 622 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 CCL3L1P16619 93 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 EEF1B2P24534 225 aaKnown RBP14.71□□□□□ -0.05
HDAC6-225ENST00000483506 P2RX3P56373 397 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 EDDM3BP56851 147 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 GABARAPL2P60520 117 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 MLLT11Q13015 90 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-225ENST00000483506 RSU1Q15404 277 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 TBCEQ15813 527 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-225ENST00000483506 PDZD9Q8IXQ8 264 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 NKAIN3Q8N8D7 197 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 UFD1Q92890 307 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 FAM192AQ9GZU8 254 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 METTL9Q9H1A3 318 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 Q9H521 79 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 IFT22Q9H7X7 185 aa14.71□□□□□ -0.05
HDAC6-225ENST00000483506 TENM1Q9UKZ4 2725 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 A0A1W2PPK0 400 aa14.7□□□□□ -0.06
HDAC6-225ENST00000483506 MRPS14O60783 128 aaKnown RBP14.7□□□□□ -0.06
HDAC6-225ENST00000483506 ZNF780AO75290 641 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-225ENST00000483506 CDRT1O95170 752 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms