RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 TSPAN9O75954 239 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 CLPXO76031 633 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 KDM4BO94953 1096 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 RAB3AP20336 220 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 DCKP27707 260 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 P2RX3P56373 397 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 SRSF4Q08170 494 aaKnown RBP16.17■□□□□ 0.18
MSH5-215ENST00000482280 KISS1Q15726 138 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 FAM189A2Q15884 450 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 CCDC58Q4VC31 144 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 SATL1Q86VE3 508 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 PARP16Q8N5Y8 322 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 TPRX1Q8N7U7 411 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 CHST4Q8NCG5 386 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 OR2T6Q8NHC8 308 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 MALSU1Q96EH3 234 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 CITED1Q99966 193 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 NPFFR1Q9GZQ6 430 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 SESN1Q9Y6P5 492 aa16.17■□□□□ 0.18
MSH5-215ENST00000482280 PSPNO60542 156 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 ALX3O95076 343 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 OR2H2O95918 312 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 DLX6P56179 175 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 PLA1AQ53H76 456 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 SLC35E4Q6ICL7 350 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 OR52W1Q6IF63 320 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 RPL22L1Q6P5R6 122 aaKnown RBP16.16■□□□□ 0.18
MSH5-215ENST00000482280 C11orf88Q6PI97 169 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 PACRGLQ8N7B6 248 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 OR4S1Q8NGB4 309 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 OR52N4Q8NGI2 321 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 NDNFQ8TB73 568 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 RPS4Y2Q8TD47 263 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 GPR148Q8TDV2 347 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 FAM192AQ9GZU8 254 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 FGF20Q9NP95 211 aaPredicted RBP16.16■□□□□ 0.18
MSH5-215ENST00000482280 PITPNC1Q9UKF7 332 aa16.16■□□□□ 0.18
MSH5-215ENST00000482280 UBE2J1Q9Y385 318 aaPredicted RBP16.16■□□□□ 0.18
MSH5-215ENST00000482280 E9PI62 339 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 DEGS1O15121 323 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 ERP29P30040 261 aaKnown RBP16.15■□□□□ 0.18
MSH5-215ENST00000482280 SOX2P48431 317 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 PROK1P58294 105 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 PPP3R1P63098 170 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 SSX2Q16385 188 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 ZNF691Q5VV52 312 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 LHFPL4Q7Z7J7 247 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 DHRSXQ8N5I4 330 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 OR11H6Q8NGC7 330 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 APH1BQ8WW43 257 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 NKX3-1Q99801 234 aaPredicted RBP16.15■□□□□ 0.18
MSH5-215ENST00000482280 JAM3Q9BX67 310 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 CLEC7AQ9BXN2 247 aa16.15■□□□□ 0.18
MSH5-215ENST00000482280 EXOSC1Q9Y3B2 195 aaKnown RBP16.15■□□□□ 0.18
MSH5-215ENST00000482280 OR3A1P47881 315 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 MTNR1BP49286 362 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 ARHGDIBP52566 201 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 SMN1Q16637 294 aaKnown RBP16.14■□□□□ 0.17
MSH5-215ENST00000482280 ZNF626Q68DY1 528 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 Q6ZTK2 550 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 CNIH3Q8TBE1 160 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 S100A13Q99584 98 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 VCXQ9H320 206 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 RANBP3Q9H6Z4 567 aaPredicted RBP16.14■□□□□ 0.17
MSH5-215ENST00000482280 FBLN5Q9UBX5 448 aa16.14■□□□□ 0.17
MSH5-215ENST00000482280 IGKV1-12A0A0C4DH73 117 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 F2RL2O00254 374 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 WBP4O75554 376 aaKnown RBP16.13■□□□□ 0.17
MSH5-215ENST00000482280 IGKV1D-12P01611 117 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 LIMS3P0CW19 117 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 LIMS4P0CW20 117 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 PAX6P26367 422 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 GTF2A1P52655 376 aaPredicted RBP16.13■□□□□ 0.17
MSH5-215ENST00000482280 SLC34A1Q06495 639 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 IL18R1Q13478 541 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 RCN1Q15293 331 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 RSU1Q15404 277 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 ARSJQ5FYB0 599 aaPredicted RBP16.13■□□□□ 0.17
MSH5-215ENST00000482280 MINOS1Q5TGZ0 78 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 ASPHD2Q6ICH7 369 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 OR4D6Q8NGJ1 314 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 TNFAIP8L1Q8WVP5 186 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 NR1H4Q96RI1 486 aaPredicted RBP16.13■□□□□ 0.17
MSH5-215ENST00000482280 CDCA4Q9BXL8 241 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 TMEM133Q9H2Q1 129 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 ING3Q9NXR8 418 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 CKLFQ9UBR5 152 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 MINOS1-NBL1R4GNA1 71 aa16.13■□□□□ 0.17
MSH5-215ENST00000482280 IGHV2-26A0A0B4J1V2 119 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 FAM90A8PA6NJQ4 464 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 VGLL3A8MV65 326 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 ODF3BA8MYP8 253 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 PEX14O75381 377 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 CLIC3O95833 236 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 LMO1P25800 156 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 PTGFRP43088 359 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 ETV1P50549 477 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 AESQ08117 197 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 CDK5R1Q15078 307 aa16.12■□□□□ 0.17
MSH5-215ENST00000482280 KRBOX4Q5JUW0 171 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms