RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 BARHL1Q9BZE3 327 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 COMMD3Q9UBI1 195 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 CLN8Q9UBY8 286 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 METRNQ9UJH8 293 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 ZNF222Q9UK12 451 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 SOX21Q9Y651 276 aaPredicted RBP10.14□□□□□ -0.79
PTPRF-213ENST00000481019 DOCK11Q5JSL3 2073 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 ANK2Q01484 3957 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 PPIAL4CA0A0B4J2A2 164 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 IGHV2-70DA0A0C4DH43 119 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 J3QT63 122 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 ZNF780AO75290 641 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-213ENST00000481019 BPNT1O95861 308 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 APOA1P02647 267 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 PGA5P0DJD9 388 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 PSG2P11465 335 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 ARSBP15848 533 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 MUC1P15941 1255 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-213ENST00000481019 HNF1AP20823 631 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 MPZP25189 248 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 SRP14P37108 136 aaKnown RBP10.13□□□□□ -0.79
PTPRF-213ENST00000481019 CEBPDP49716 269 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-213ENST00000481019 OR10A3P58181 314 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 PAX8Q06710 450 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 GPR176Q14439 515 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 MICBQ29980 383 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 KRTAP21-3Q3LHN1 58 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 ATPAF1Q5TC12 328 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-213ENST00000481019 BAIAP2L2Q6UXY1 529 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 C1QL2Q7Z5L3 287 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 CD177Q8N6Q3 437 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 POC1AQ8NBT0 407 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 ANGPTL6Q8NI99 470 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 S100A16Q96FQ6 103 aaKnown RBP10.13□□□□□ -0.79
PTPRF-213ENST00000481019 SPACA5Q96QH8 159 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 MDFIQ99750 246 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 KAAG1Q9UBP8 84 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 OR5V1Q9UGF6 321 aa10.13□□□□□ -0.79
PTPRF-213ENST00000481019 A0A0G2JK05 382 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 KIR2DS1A0A191URI9 304 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 METTL21EPA6NDL7 271 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 FAM25AB3EWG3 89 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 FAM25CB3EWG5 89 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 FAM25GB3EWG6 89 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 H3BUI4 141 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 J3QLI3 93 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 CYB5AP00167 134 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 PLATP00750 562 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 GLRA1P23415 457 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 AZGP1P25311 298 aaKnown RBP10.12□□□□□ -0.79
PTPRF-213ENST00000481019 ETV6P41212 452 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 MTCP1P56278 107 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 CAV3P56539 151 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 ERVK11-1P61568 191 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 IKZF1Q13422 519 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 KISS1Q15726 138 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 ACP7Q6ZNF0 438 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 ZNF788Q6ZQV5 615 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 NLRC3Q7RTR2 1065 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 ZNF573Q86YE8 665 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 SLAMF9Q96A28 289 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 RFT1Q96AA3 541 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 FAM3DQ96BQ1 224 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 ORAI1Q96D31 301 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 DIRAS2Q96HU8 199 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 NKX3-1Q99801 234 aaPredicted RBP10.12□□□□□ -0.79
PTPRF-213ENST00000481019 NRIP2Q9BQI9 281 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 NUDT16L1Q9BRJ7 211 aaKnown RBP10.12□□□□□ -0.79
PTPRF-213ENST00000481019 LIN7BQ9HAP6 207 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 ELL3Q9HB65 397 aaPredicted RBP10.12□□□□□ -0.79
PTPRF-213ENST00000481019 HES4Q9HCC6 221 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 MTCH1Q9NZJ7 389 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 NLKQ9UBE8 527 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 IL36RNQ9UBH0 155 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 DNAJB11Q9UBS4 358 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 MAB21L2Q9Y586 359 aa10.12□□□□□ -0.79
PTPRF-213ENST00000481019 IGHV3OR16-10A0A075B7F0 116 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 A0A0A6YYH2 397 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 FABP12A6NFH5 140 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 A6NJ64 397 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 OR2AT4A6NND4 320 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 CTDSP2O14595 271 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 NDUFA2O43678 99 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 NOS1APO75052 506 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-213ENST00000481019 IGHV4-38-2P0DP08 117 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 RAB6AP20340 208 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 GATA3P23771 443 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 CPT2P23786 658 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 CD40LGP29965 261 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 TNFSF8P32971 234 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 PITPNAQ00169 270 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 KCNJ8Q15842 424 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 UBE2NLQ5JXB2 153 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 HES5Q5TA89 166 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 RAB12Q6IQ22 244 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 BTN2A1Q7KYR7 527 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 SAMD12Q8N8I0 201 aa10.11□□□□□ -0.79
PTPRF-213ENST00000481019 ZSCAN4Q8NAM6 433 aaPredicted RBP10.11□□□□□ -0.79
PTPRF-213ENST00000481019 OR52N4Q8NGI2 321 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms