RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 CLVS1Q8IUQ0 354 aaPredicted RBP6.34□□□□□ -1.39
LSM5-210ENST00000480956 OR10J6PQ8NGY7 276 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 TNFAIP8L1Q8WVP5 186 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 MROQ9BYG7 248 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 SLC25A39Q9BZJ4 359 aaPredicted RBP6.34□□□□□ -1.39
LSM5-210ENST00000480956 ISG20L2Q9H9L3 353 aaKnown RBP6.34□□□□□ -1.39
LSM5-210ENST00000480956 MIEF1Q9NQG6 463 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 RWDD2AQ9UIY3 292 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 ANKRD36BQ8N2N9 1353 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 PCDH11XQ9BZA7 1347 aa6.34□□□□□ -1.39
LSM5-210ENST00000480956 SMIM1B2RUZ4 78 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 PPP5D1E7EU14 171 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 PPBPP02775 128 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 ERGP11308 486 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 TCN2P20062 427 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 ZNF45Q02386 682 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 ZNF630Q2M218 657 aaPredicted RBP6.33□□□□□ -1.4
LSM5-210ENST00000480956 C1orf100Q5SVJ3 147 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 OTPQ5XKR4 325 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 TMEM215Q68D42 235 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 SFXN4Q6P4A7 337 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 OR51S1Q8NGJ8 323 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 OR10A6Q8NH74 314 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 ZNF519Q8TB69 540 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 RGP1Q92546 391 aaPredicted RBP6.33□□□□□ -1.4
LSM5-210ENST00000480956 IL22RA2Q969J5 263 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 METTL26Q96S19 204 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 EMC6Q9BV81 110 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 DCSTAMPQ9H295 470 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 MIXL1Q9H2W2 232 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 ENY2Q9NPA8 101 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 DMAC2Q9NW81 257 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 DOK5Q9P104 306 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 ZNF629Q9UEG4 869 aaPredicted RBP6.33□□□□□ -1.4
LSM5-210ENST00000480956 PIK3C2AO00443 1686 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 BRCA1P38398 1863 aaKnown RBP6.33□□□□□ -1.4
LSM5-210ENST00000480956 IGHV1OR15-1A0A075B7D0 117 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 IGHV3OR16-9A0A0B4J2B5 98 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 K7N7A8 449 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 S1PR2O95136 353 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 IL3P08700 152 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 GKN3PP0CG01 181 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 AQP1P29972 269 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 FMO3P31513 532 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 GNG3P63215 75 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 PSPHP78330 225 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 SLC35A2P78381 396 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 APOFQ13790 326 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 NDUFA5Q16718 116 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 UNQ9370/PRO34162Q6UXP9 181 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 UBALD2Q8IYN6 164 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 ZNF485Q8NCK3 441 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 OR10AD1Q8NGE0 317 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 MFSD8Q8NHS3 518 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 SPPL2BQ8TCT7 592 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 LRRC58Q96CX6 371 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 TSC22D3Q99576 134 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 ZNF717Q9BY31 904 aaPredicted RBP6.33□□□□□ -1.4
LSM5-210ENST00000480956 OCR1Q9BZK8 76 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 SRMSQ9H3Y6 488 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 UGT2A1Q9Y4X1 527 aa6.33□□□□□ -1.4
LSM5-210ENST00000480956 I3L4J1 428 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 NTN3O00634 580 aaPredicted RBP6.32□□□□□ -1.4
LSM5-210ENST00000480956 RNF224P0DH78 156 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 LAMP1P11279 417 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 SNAP25P60880 206 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 RPS23P62266 143 aaKnown RBP6.32□□□□□ -1.4
LSM5-210ENST00000480956 RPS21P63220 83 aaKnown RBP6.32□□□□□ -1.4
LSM5-210ENST00000480956 CDK10Q15131 360 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 ZNF774Q6NX45 483 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 SLC22A18ASQ8N1D0 253 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 FAM71E2Q8N5Q1 922 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 TAMM41Q96BW9 452 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 HAUS1Q96CS2 278 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 SUCNR1Q9BXA5 334 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 OR51E2Q9H255 320 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 PARLQ9H300 379 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 TAS2R5Q9NYW4 299 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 OPTCQ9UBM4 332 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 LTBP4Q8N2S1 1624 aa6.32□□□□□ -1.4
LSM5-210ENST00000480956 MARF1Q9Y4F3 1742 aaKnown RBP6.32□□□□□ -1.4
LSM5-210ENST00000480956 C1orf167Q5SNV9 1468 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 A0A0U1RQV1 116 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 SLC6A1P30531 599 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 DRD3P35462 400 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 REG1BP48304 166 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 RAB5BP61020 215 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 PRR3P79522 188 aaKnown RBP6.31□□□□□ -1.4
LSM5-210ENST00000480956 PSG4Q00888 419 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 IFITM2Q01629 132 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 LAMTOR4Q0VGL1 99 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 TMEM255AQ5JRV8 349 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 LCE1DQ5T752 114 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 TMEM86BQ8N661 226 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 OR13D1Q8NGV5 346 aa6.31□□□□□ -1.4
LSM5-210ENST00000480956 GEMIN6Q8WXD5 167 aaKnown RBP6.31□□□□□ -1.4
LSM5-210ENST00000480956 SRSF12Q8WXF0 261 aaKnown RBP6.31□□□□□ -1.4
LSM5-210ENST00000480956 RRAGDQ9NQL2 400 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms