RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 INMTO95050 263 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 TFF1P04155 84 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 PIPP12273 146 aaPredicted RBP9.3□□□□□ -0.92
CCM2-213ENST00000480658 CCL3L1P16619 93 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 GABRB1P18505 474 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 RAB3AP20336 220 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 BCL3P20749 454 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 LMO1P25800 156 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 DCKP27707 260 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 BRS3P32247 399 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 KCNJ3P48549 501 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 PPP3R1P63098 170 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 EDDM3AQ14507 147 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 HERPUD1Q15011 391 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 TTC23Q5W5X9 447 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 ASPHD2Q6ICH7 369 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 SLC35E4Q6ICL7 350 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 RPL22L1Q6P5R6 122 aaKnown RBP9.3□□□□□ -0.92
CCM2-213ENST00000480658 ZNF782Q6ZMW2 699 aaPredicted RBP9.3□□□□□ -0.92
CCM2-213ENST00000480658 C11orf42Q8N5U0 333 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 OR13C9Q8NGT0 318 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 GPR148Q8TDV2 347 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 TMEM133Q9H2Q1 129 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 VCXQ9H320 206 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 RBFOX1Q9NWB1 397 aaKnown RBP9.3□□□□□ -0.92
CCM2-213ENST00000480658 ERVK13-1Q9NX77 482 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 CKLFQ9UBR5 152 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 TCF19Q9Y242 345 aa9.3□□□□□ -0.92
CCM2-213ENST00000480658 IGKV1-9A0A0C4DH69 117 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 ZNF780AO75290 641 aaPredicted RBP9.29□□□□□ -0.92
CCM2-213ENST00000480658 ZFPL1O95159 310 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 ZNF44P15621 663 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 HTR1DP28221 377 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 PTGFRP43088 359 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 DLX6P56179 175 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 NANOS3P60323 173 aaKnown RBP9.29□□□□□ -0.92
CCM2-213ENST00000480658 DYNC1I2Q13409 638 aaKnown RBP9.29□□□□□ -0.92
CCM2-213ENST00000480658 KISS1Q15726 138 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 ELP2Q6IA86 826 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 HEPN1Q6WQI6 88 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 LINC00596Q86U02 117 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 RDH10Q8IZV5 341 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 ZNF565Q8N9K5 539 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 PXT1Q8NFP0 134 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 OR4D6Q8NGJ1 314 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 NDNFQ8TB73 568 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 CORO2AQ92828 525 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 S100A13Q99584 98 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 BARHL1Q9BZE3 327 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 NCOR1P1Q9H4R4 102 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 FAM118AQ9NWS6 357 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 GSTK1Q9Y2Q3 226 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 HSPE1-MOB4S4R3N1 261 aa9.29□□□□□ -0.92
CCM2-213ENST00000480658 IGHV2-26A0A0B4J1V2 119 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 OOSP1A8MZH6 123 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 H3BSH0 61 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 OR2H2O95918 312 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 CSF1P09603 554 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 TMEM225BP0DP42 221 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 PRRX1P54821 245 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 TAS2R43P59537 309 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 PAX5Q02548 391 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 IL13RA2Q14627 380 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 FAM189A2Q15884 450 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 LHFPL3Q86UP9 236 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 GPER1Q99527 375 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 PRSS22Q9GZN4 317 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 CHST6Q9GZX3 395 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 RAB9BQ9NP90 201 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 FGF20Q9NP95 211 aaPredicted RBP9.28□□□□□ -0.92
CCM2-213ENST00000480658 MYRFQ9Y2G1 1151 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 EXOSC1Q9Y3B2 195 aaKnown RBP9.28□□□□□ -0.92
CCM2-213ENST00000480658 AMMECR1Q9Y4X0 333 aaPredicted RBP9.28□□□□□ -0.92
CCM2-213ENST00000480658 MGAM2Q2M2H8 2515 aa9.28□□□□□ -0.92
CCM2-213ENST00000480658 TMEM82A0PJX8 343 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 ODAMA1E959 279 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 MEGF11A6BM72 1044 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 ZNF729A6NN14 1252 aaPredicted RBP9.27□□□□□ -0.93
CCM2-213ENST00000480658 LEUTXA8MZ59 168 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 F8VVB4 439 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 F8VWA3 439 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 M0QZK8 103 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 SIRPB1O00241 398 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 TOR1AO14656 332 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 DEGS1O15121 323 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 PSPNO60542 156 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 BAG2O95816 211 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 C21orf33P30042 268 aaPredicted RBP9.27□□□□□ -0.93
CCM2-213ENST00000480658 MNDAP41218 407 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 OR3A1P47881 315 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 NPBWR2P48146 333 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 EFNB2P52799 333 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 DLX1P56177 255 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 BDH1Q02338 343 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 PRB3Q04118 309 aaPredicted RBP9.27□□□□□ -0.93
CCM2-213ENST00000480658 SLC34A1Q06495 639 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 GPR176Q14439 515 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 RSU1Q15404 277 aa9.27□□□□□ -0.93
CCM2-213ENST00000480658 SSX2Q16385 188 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms