RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 COMMD2Q86X83 199 aa9.27□□□□□ -0.93
SIK3-210ENST00000480468 OR2V1Q8NHB1 315 aa9.27□□□□□ -0.93
SIK3-210ENST00000480468 MRGPRX4Q96LA9 322 aa9.27□□□□□ -0.93
SIK3-210ENST00000480468 DIRC2Q96SL1 478 aa9.27□□□□□ -0.93
SIK3-210ENST00000480468 RTN4RQ9BZR6 473 aa9.27□□□□□ -0.93
SIK3-210ENST00000480468 NXF5Q9H1B4 397 aaKnown RBP9.27□□□□□ -0.93
SIK3-210ENST00000480468 RIMS4Q9H426 269 aaPredicted RBP9.27□□□□□ -0.93
SIK3-210ENST00000480468 PLEKHJ1Q9NW61 149 aa9.27□□□□□ -0.93
SIK3-210ENST00000480468 RNF150Q9ULK6 438 aa9.27□□□□□ -0.93
SIK3-210ENST00000480468 CLEC18AA5D8T8 446 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 ALG1L2C9J202 215 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 H7BYZ3 331 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 ITGB1BP1O14713 200 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 MSTNO14793 375 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 TNFSF13O75888 250 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 HRASP01112 189 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 IDH3GP51553 393 aaPredicted RBP9.26□□□□□ -0.93
SIK3-210ENST00000480468 LBX1P52954 281 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 HIST1H3AP68431 136 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 SHHQ15465 462 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 LHX8Q68G74 356 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 C6orf201Q7Z4U5 140 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 MRGPRGQ86SM5 289 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 ODF3L1Q8IXM7 274 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 CLEC18CQ8NCF0 446 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 OR5L1Q8NGL2 311 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 GPR119Q8TDV5 335 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 NEK7Q8TDX7 302 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 MOB3AQ96BX8 217 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 ADOQ96SZ5 270 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 OR6C3Q9NZP0 311 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 ZFP30Q9Y2G7 519 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 CACNA1IQ9P0X4 2223 aa9.26□□□□□ -0.93
SIK3-210ENST00000480468 YLPM1P49750 1951 aaKnown RBP9.26□□□□□ -0.93
SIK3-210ENST00000480468 A0A1W2PP55 124 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 DUXBA0A1W2PPF3 345 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 A0A1W2PQU0 124 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 NKX2-6A6NCS4 301 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 ZNF850A8MQ14 1090 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 PHF1O43189 567 aaPredicted RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 NUDT14O95848 222 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 IFNA1P01562 189 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 CD55P08174 381 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 FOSL2P15408 326 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 GZMHP20718 246 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 OMGP23515 440 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 CD82P27701 267 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 CTHP32929 405 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 GALR1P47211 349 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 TNFSF10P50591 281 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 RUNX1Q01196 453 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 PRTGQ2VWP7 1150 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 PHLDA2Q53GA4 152 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 TSPO2Q5TGU0 170 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 CNKSR3Q6P9H4 555 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 ZNF705AQ6ZN79 300 aaPredicted RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 AGBL5Q8NDL9 886 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 OR1E3Q8WZA6 343 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 PHF3Q92576 2039 aaKnown RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 FAM71F1Q96KD3 344 aaPredicted RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 Q96M66 194 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 TMEM56Q96MV1 263 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 GAL3ST2Q9H3Q3 398 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 PRSS50Q9UI38 385 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 NXT1Q9UKK6 140 aaKnown RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 TMEM56-RWDD3S4R434 201 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 TRBV23OR9-2A0A075B6M9 112 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 PRKNO60260 465 aaPredicted RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 WISP1O95388 367 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 LCATP04180 440 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 UMODP07911 640 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 SRP14P37108 136 aaKnown RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 CNN1P51911 297 aaKnown RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 ZNF121P58317 390 aaPredicted RBP9.25□□□□□ -0.93
SIK3-210ENST00000480468 MPV17LQ2QL34 196 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 IL22RA1Q8N6P7 574 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 POC1BQ8TC44 478 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 TMEM222Q9H0R3 208 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 ZNF665Q9H7R5 613 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 PARD6AQ9NPB6 346 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 LHFPL6Q9Y693 200 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 PCNX3Q9H6A9 2034 aa9.25□□□□□ -0.93
SIK3-210ENST00000480468 MAP1LC3B2A6NCE7 125 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 OTOL1A6NHN0 477 aaPredicted RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 ZFP92A6NM28 416 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 C17orf105B2RV13 164 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 SSSCA1O60232 199 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 KBTBD11O94819 623 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 ONECUT2O95948 504 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 NPBWR2P48146 333 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 UBE2NP61088 152 aaKnown RBP9.24□□□□□ -0.93
SIK3-210ENST00000480468 LCN2P80188 198 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 ID3Q02535 119 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 ZNF92Q03936 586 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 ADIRFQ15847 76 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 KCNMB1Q16558 191 aa9.24□□□□□ -0.93
SIK3-210ENST00000480468 BSXQ3C1V8 233 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms