RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	CAPZA1	P52907	286 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	GP2	P55259	537 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	FABP5	Q01469	135 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	GPR176	Q14439	515 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	KISS1	Q15726	138 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	TPRA1	Q86W33	373 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	FAM90A1	Q86YD7	464 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	OR13C5	Q8NGS8	318 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	TRMT10A	Q8TBZ6	339 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	NPRL2	Q8WTW4	380 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	AQP3	Q92482	292 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	C12orf43	Q96C57	262 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	KCTD7	Q96MP8	289 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	UQCC2	Q9BRT2	126 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	PCGF1	Q9BSM1	259 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	CLN8	Q9UBY8	286 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	IGKV1-9	A0A0C4DH69	117 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	NOS1AP	O75052	506 aa	Predicted RBP	12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	LIPF	P07098	398 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	SMIM18	P0DKX4	95 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	MUC1	P15941	1255 aa	Predicted RBP	12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	CALR	P27797	417 aa	Known RBP	12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	PITPNB	P48739	271 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	MPPED2	Q15777	294 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	MICB	Q29980	383 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	DDI2	Q5TDH0	399 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	PRAMEF6	Q5VXH4	476 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	TMEM91	Q6ZNR0	172 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	SATL1	Q86VE3	508 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	RPL3L	Q92901	407 aa	Known RBP	12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	TMEM246	Q9BRR3	403 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	GHRL	Q9UBU3	117 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	FBLN5	Q9UBX5	448 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894	GLS2	Q9UI32	602 aa		12.78	□□□□□ -0.36
HDLBP-238	ENST00000479894		A0A1W2PPK0	400 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894		H3BUI4	141 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	LGALS8	O00214	317 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	AIRE	O43918	545 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	TMEM127	O75204	238 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	UBB	P0CG47	229 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	TMEM225B	P0DP42	221 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	MMP9	P14780	707 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	PDZK1IP1	Q13113	114 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	SMIM21	Q3B7S5	101 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	ZNF404	Q494X3	552 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	WDR25	Q64LD2	544 aa	Predicted RBP	12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	C11orf88	Q6PI97	169 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	WDR82	Q6UXN9	313 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	OR13F1	Q8NGS4	319 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	LRRC29	Q8WV35	223 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	CFHR4	Q92496	578 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	PHF21A	Q96BD5	680 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	DNAJB11	Q9UBS4	358 aa		12.77	□□□□□ -0.37
HDLBP-238	ENST00000479894	IGHV1-69D	A0A0B4J2H0	117 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	NOL3	O60936	208 aa	Known RBP	12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	TOX4	O94842	621 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	IGHV1-69	P01742	117 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	MAS1	P04201	325 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	MTNR1B	P49286	362 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	POU3F4	P49335	361 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	SLC25A26	Q70HW3	274 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	CROCCP3	Q8IVE0	287 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	C11orf53	Q8IXP5	236 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	JAGN1	Q8N5M9	183 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	POC1A	Q8NBT0	407 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	PXT1	Q8NFP0	134 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	ZNF420	Q8TAQ5	688 aa	Predicted RBP	12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	YIPF6	Q96EC8	236 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	CEP19	Q96LK0	163 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	TBX15	Q96SF7	602 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	CHCHD6	Q9BRQ6	235 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	TXNL4B	Q9NX01	149 aa	Known RBP	12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	BIRC6	Q9NR09	4857 aa		12.76	□□□□□ -0.37
HDLBP-238	ENST00000479894	TRAV8-7	A0A075B6U6	113 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	IGHV3-64D	A0A0J9YX35	117 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	LOC100506127	A0A0U1RQW1	187 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	OOEP	A6NGQ2	149 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	NXPH2	O95156	264 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	LHB	P01229	141 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	SFTPB	P07988	381 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	PGA5	P0DJD9	388 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	GLRA1	P23415	457 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	GADD45A	P24522	165 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	PTGFR	P43088	359 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	ALDH3B2	P48448	385 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	NPY4R	P50391	375 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	COL10A1	Q03692	680 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	RSU1	Q15404	277 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	CD276	Q5ZPR3	534 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	C22orf42	Q6IC83	251 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	WDR86	Q86TI4	376 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	ANGPTL5	Q86XS5	388 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	OR52N4	Q8NGI2	321 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	TNFAIP8L1	Q8WVP5	186 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	BCL7B	Q9BQE9	202 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	DNTTIP1	Q9H147	329 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	METTL9	Q9H1A3	318 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	PPP1R3E	Q9H7J1	279 aa		12.75	□□□□□ -0.37
HDLBP-238	ENST00000479894	VPREB3	Q9UKI3	123 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms