RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 PLEK2Q9NYT0 353 aa17.99■□□□□ 0.47
COL13A1-208ENST00000479733 SHISA7A6NL88 538 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 DYNLT3P51808 116 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 RSPO1Q2MKA7 263 aaPredicted RBP17.98■□□□□ 0.47
COL13A1-208ENST00000479733 SPIN3Q5JUX0 258 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 PHYHD1Q5SRE7 291 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 FAM210BQ96KR6 192 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 TPSD1Q9BZJ3 242 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 FOXD3Q9UJU5 478 aaPredicted RBP17.98■□□□□ 0.47
COL13A1-208ENST00000479733 BRWD1Q9NSI6 2320 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 TRBV11-1A0A0K0K1C0 115 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 LILRA5A6NI73 299 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 PGA5P0DJD9 388 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 GLIPR1P48060 266 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 HERV-K104P61576 105 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 RAB11AP62491 216 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 VAMP2P63027 116 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 MRPS21P82921 87 aaKnown RBP17.98■□□□□ 0.47
COL13A1-208ENST00000479733 AKR1C8PQ5T2L2 129 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 FAM180AQ6UWF9 173 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 Q6ZS52 159 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 BCO1Q9HAY6 547 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 GNG13Q9P2W3 67 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 PISDQ9UG56 409 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 TMED3Q9Y3Q3 217 aa17.98■□□□□ 0.47
COL13A1-208ENST00000479733 BTBD17A6NE02 478 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 PROB1E7EW31 1015 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 D2HGDHQ8N465 521 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 TMEM252Q8N6L7 170 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 PLPP5Q8NEB5 264 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 OR10AD1Q8NGE0 317 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 MVB12AQ96EY5 273 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 PACRGQ96M98 296 aaPredicted RBP17.97■□□□□ 0.47
COL13A1-208ENST00000479733 UBE2J1Q9Y385 318 aaPredicted RBP17.97■□□□□ 0.47
COL13A1-208ENST00000479733 V9GYS6 101 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 IGKV1-27A0A075B6S5 117 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 M0R135 149 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 PHOX2AO14813 284 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 ST8SIA5O15466 376 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 HSPA12AO43301 675 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 ZNF799Q96GE5 643 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 CD207Q9UJ71 328 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 SDK2Q58EX2 2172 aa17.97■□□□□ 0.47
COL13A1-208ENST00000479733 A0A1W2PPC4 97 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 TSTD3H0UI37 97 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 CA11O75493 328 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 OR2J2O76002 312 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 REC114Q7Z4M0 266 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 CMTM1Q8IZ96 169 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 LILRB2Q8N423 598 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 LRTM2Q8N967 370 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 OXGR1Q96P68 337 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 SMDT1Q9H4I9 107 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 A0A087WWC5 75 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 C3orf85A0A1B0GTC6 90 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 ZFP92A6NM28 416 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 DRD1P21728 446 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 ZNF154Q13106 437 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 ZNF880Q6PDB4 577 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 ZNF695Q8IW36 515 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 GJC3Q8NFK1 279 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 MRGPRX4Q96LA9 322 aa17.96■□□□□ 0.47
COL13A1-208ENST00000479733 A0A1B0GX78 115 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 H3BP45 60 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 MSR1P21757 451 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 HLA-DRB3P79483 266 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 DPPA2Q7Z7J5 298 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 PTBP3O95758 552 aaKnown RBP17.95■□□□□ 0.46
COL13A1-208ENST00000479733 PKIAP61925 76 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 DLX2Q07687 328 aaPredicted RBP17.95■□□□□ 0.46
COL13A1-208ENST00000479733 USF2Q15853 346 aaPredicted RBP17.95■□□□□ 0.46
COL13A1-208ENST00000479733 NAT6Q93015 286 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 PLEKHF2Q9H8W4 249 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 CALHM2Q9HA72 323 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 ADAM20O43506 726 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 TMEM50AO95807 157 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 FUT3P21217 361 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 CFHR1Q03591 330 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 MPV17LQ2QL34 196 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 PRAMEF20Q5VT98 475 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 CLDND2Q8NHS1 167 aa17.95■□□□□ 0.46
COL13A1-208ENST00000479733 A0A087WZY1 265 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 MPPED1O15442 326 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 TLX3O43711 291 aaPredicted RBP17.94■□□□□ 0.46
COL13A1-208ENST00000479733 ENDOGQ14249 297 aaKnown RBP17.94■□□□□ 0.46
COL13A1-208ENST00000479733 FBXO46Q6PJ61 603 aaPredicted RBP17.94■□□□□ 0.46
COL13A1-208ENST00000479733 ZNF837Q96EG3 531 aaPredicted RBP17.94■□□□□ 0.46
COL13A1-208ENST00000479733 MISP3Q96FF7 219 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 SSX3Q99909 188 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 A0A0U1RQV5 110 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 EPOPA6NHQ4 379 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 SLC31A2O15432 143 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 PITX3O75364 302 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 IGLV3-1P01715 115 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 IL2RGP31785 369 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 CD200P41217 278 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 SUMO3P55854 103 aaPredicted RBP17.94■□□□□ 0.46
COL13A1-208ENST00000479733 TLE1Q04724 770 aa17.94■□□□□ 0.46
COL13A1-208ENST00000479733 SNIP1Q8TAD8 396 aaKnown RBP17.94■□□□□ 0.46
COL13A1-208ENST00000479733 ZNF286AQ9HBT8 521 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms