RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 MADCAM1Q13477 382 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 GPR176Q14439 515 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 MPPED2Q15777 294 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 MOGAT2Q3SYC2 334 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 SPRNQ5BIV9 151 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 NHLRC3Q5JS37 347 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 TMEM69Q5SWH9 247 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 ELP2Q6IA86 826 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 C11orf71Q6IPW1 123 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 METAP1DQ6UB28 335 aaPredicted RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 FAM131AQ6UXB0 335 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 WDR82Q6UXN9 313 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 RTN4RL2Q86UN3 420 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 DTX2Q86UW9 622 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 C11orf53Q8IXP5 236 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 IZUMO1Q8IYV9 350 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 BATF2Q8N1L9 274 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 MUC15Q8N387 334 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 POC1AQ8NBT0 407 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 OR4M2Q8NGB6 313 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 ZNF488Q96MN9 340 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 S100A13Q99584 98 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 GAL3ST1Q99999 423 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 NUDT16L1Q9BRJ7 211 aaKnown RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 NICN1Q9BSH3 213 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 URM1Q9BTM9 101 aaKnown RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 TM2D1Q9BX74 207 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 MEGF9Q9H1U4 602 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 ATG5Q9H1Y0 275 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 MS4A5Q9H3V2 200 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 HES4Q9HCC6 221 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 UFSP2Q9NUQ7 469 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 RBFOX1Q9NWB1 397 aaKnown RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 IL36RNQ9UBH0 155 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 POLDIP2Q9Y2S7 368 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 ARID1AO14497 2285 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 FBN2P35556 2912 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 APCP25054 2843 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 DYSFO75923 2080 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 A1L4Q6 167 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 METTL21EPA6NDL7 271 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 CDIPTO14735 213 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 AKR7A2O43488 359 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 XRCC3O43542 346 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 TPPPO94811 219 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 CD8AP01732 235 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 CSTBP04080 98 aaKnown RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 SOD3P08294 240 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 ACAA1P09110 424 aaPredicted RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 GTF2F2P13984 249 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 CPT2P23786 658 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 CFHR2P36980 270 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 PMELP40967 661 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 PITPNBP48739 271 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 PPP5CP53041 499 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 IL18Q14116 193 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 IL13RA2Q14627 380 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 FAM189A2Q15884 450 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 RNF151Q2KHN1 245 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 PCGF3Q3KNV8 242 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 PIGYQ3MUY2 71 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 RAB12Q6IQ22 244 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 PYHIN1Q6K0P9 492 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 ZNF826PQ6ZT77 177 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 MOGAT3Q86VF5 341 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 Q8IYB0 196 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 BCL6BQ8N143 479 aaPredicted RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 FAM58AQ8N1B3 248 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 OSR2Q8N2R0 312 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 FAM89BQ8N5H3 189 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 OR56B1Q8NGI3 324 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 OR51T1Q8NGJ9 327 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 OR10R2Q8NGX6 335 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 OR10Z1Q8NGY1 313 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 Q8TCH9 128 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 EMG1Q92979 244 aaKnown RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 BORCS5Q969J3 196 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 MRPS24Q96EL2 167 aaKnown RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 S100A16Q96FQ6 103 aaKnown RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 C16orf92Q96LL3 132 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 ABHD1Q96SE0 405 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 SDHCQ99643 169 aaPredicted RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 TRAF4Q9BUZ4 470 aaPredicted RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 SELENOIQ9C0D9 397 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 FN3KRPQ9HA64 309 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 UBTD1Q9HAC8 227 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 RHOFQ9HBH0 211 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 DIABLOQ9NR28 239 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 PCDHB16Q9NRJ7 776 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 CBLN4Q9NTU7 201 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 FAIMQ9NVQ4 179 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 C1orf123Q9NWV4 160 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 ZNF581Q9P0T4 197 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 RABL2AQ9UBK7 228 aaPredicted RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 IL19Q9UHD0 177 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 RABL2BQ9UNT1 228 aa5.59□□□□□ -1.51
USP48-208ENST00000479177 MAP1AP78559 2803 aaPredicted RBP5.59□□□□□ -1.51
USP48-208ENST00000479177 ITPR2Q14571 2701 aa5.59□□□□□ -1.52
USP48-208ENST00000479177 CCDC168Q8NDH2 2452 aa5.58□□□□□ -1.52
USP48-208ENST00000479177 TRAV18A0A075B6X5 111 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms