RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 HACD1B0YJ81 288 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 CENPBD1B2RD01 187 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 FAM25AB3EWG3 89 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 FAM25CB3EWG5 89 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 FAM25GB3EWG6 89 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 CLDN25C9JDP6 229 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 H3BNH8 94 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 H3BSA7 217 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 GFYI3L273 518 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 M0R3G1 203 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PSMD11O00231 422 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PSMD12O00232 456 aaPredicted RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 ANGPT2O15123 496 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 UGT1A9O60656 530 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 SNNO75324 88 aaPredicted RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 CA11O75493 328 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 CDK14O94921 469 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 LGI1O95970 557 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 INSP01308 110 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 IGLV3-25P01717 112 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 HLA-DRAP01903 254 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 SMR3BP02814 79 aaPredicted RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PSG2P11465 335 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 MLNP12872 115 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PGAM1P18669 254 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 IMPDH1P20839 514 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 MAGP20916 626 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 KDELR1P24390 212 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 GCAP28676 217 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 IL12AP29459 219 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 RPL22P35268 128 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 SERPINB5P36952 375 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 CTRLP40313 264 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 SLC26A3P40879 764 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 CDKN2BP42772 138 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PPT1P50897 306 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 RPL14P50914 215 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 GPX6P59796 221 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 MRPS22P82650 360 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 INCA1Q0VD86 236 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 BST2Q10589 180 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 BNIP2Q12982 314 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 APOFQ13790 326 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PRPSAP1Q14558 356 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 DGUOKQ16854 277 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 BOLA3Q53S33 107 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PRAMEF20Q5VT98 475 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 TTC23Q5W5X9 447 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 LRRC66Q68CR7 880 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 OR2A2Q6IF42 318 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PMF1Q6P1K2 205 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 BRD3OSQ6XYD6 125 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 RTL4Q6ZR62 310 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 LINC00299Q6ZSB3 139 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 DHFR2Q86XF0 187 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 ENTHD1Q8IYW4 607 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 FTMTQ8N4E7 242 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF555Q8NEP9 628 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 DEFB108BQ8NET1 73 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 OR52E2Q8NGJ4 325 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 OR51S1Q8NGJ8 323 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 RPUSD4Q96CM3 377 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 ASB9Q96DX5 294 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 PPP1R2P1Q96PQ5 205 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 EBNA1BP2Q99848 306 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 BCL7BQ9BQE9 202 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 RACGAP1Q9H0H5 632 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 UGT1A7Q9HAW7 530 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 UGT1A10Q9HAW8 530 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 ZNF229Q9UJW7 825 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 COPS3Q9UNS2 423 aa3.21□□□□□ -1.9
CCDC171-207ENST00000478913 YARS2Q9Y2Z4 477 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 FAM32AQ9Y421 112 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
CCDC171-207ENST00000478913 C1orf232A0A0U1RR37 186 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 PNMA8CA0A1B0GUJ8 204 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 GJE1A6NN92 205 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 M0R2N4 97 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 PLIN3O60664 434 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 SERPINB7O75635 380 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 POP7O75817 140 aaKnown RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 COX5AP20674 150 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 IL32P24001 234 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 CALCRP30988 508 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 SHMT2P34897 504 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 PTGDSP41222 190 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 GSSP48637 474 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ERFP50548 548 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 IDH3GP51553 393 aaPredicted RBP3.2□□□□□ -1.9
CCDC171-207ENST00000478913 CDH6P55285 790 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 PSME3P61289 254 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 ATP6V0D1P61421 351 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 STK11Q15831 433 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 SPANXN3Q5MJ09 141 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 C1orf100Q5SVJ3 147 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 GPR107Q5VW38 600 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 EPGNQ6UW88 154 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 AKAP14Q86UN6 197 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 SLC35F2Q8IXU6 374 aa3.2□□□□□ -1.9
CCDC171-207ENST00000478913 LYPD1Q8N2G4 141 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms