RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 FAM90A5PA8MXJ8 464 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 SEC14L6B5MCN3 397 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 LOC110117498-PIK3R3F6TDL0 507 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 E2F6O75461 281 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 ATP5HO75947 161 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 FAM90A15PP0C7V4 464 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 FAM90A13PP0C7W8 464 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 FAM90A14PP0C7W9 464 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 FAM90A24PP0C7X0 464 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 DUSP1P28562 367 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 CD34P28906 385 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 P2RX3P56373 397 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 RBM39Q14498 530 aaKnown RBP13.52□□□□□ -0.25
VIM-204ENST00000478746 SLC25A26Q70HW3 274 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 SBSPONQ8IVN8 264 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 ASB17Q8WXJ9 295 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 FEVQ99581 238 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 TTTY10Q9BZA0 68 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 DCLRE1BQ9H816 532 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 TAS2R3Q9NYW6 316 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 ZNF256Q9Y2P7 627 aaPredicted RBP13.52□□□□□ -0.25
VIM-204ENST00000478746 TMEM14AQ9Y6G1 99 aa13.52□□□□□ -0.25
VIM-204ENST00000478746 TCRBV5S2A0A599 114 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 DHRS7CA6NNS2 312 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 PRR32B1ATL7 298 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 MRPL3P09001 348 aaKnown RBP13.51□□□□□ -0.25
VIM-204ENST00000478746 SLC2A5P22732 501 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 GDNFP39905 211 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 RASSF2P50749 326 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 ZNF91Q05481 1191 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 APOFQ13790 326 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 KIR2DS1Q14954 304 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 BCL2L15Q5TBC7 163 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 TEX38Q6PEX7 206 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 LCNL1Q6ZST4 164 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 MEPCEQ7L2J0 689 aaKnown RBP13.51□□□□□ -0.25
VIM-204ENST00000478746 SLC35E3Q7Z769 313 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 FOXRED2Q8IWF2 684 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 ELMOD2Q8IZ81 293 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 C5orf56Q8N8D9 126 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 OR8U1Q8NH10 309 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 GIPC3Q8TF64 312 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 CORO2AQ92828 525 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 IL36RNQ9UBH0 155 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 OR52A1Q9UKL2 312 aa13.51□□□□□ -0.25
VIM-204ENST00000478746 IGKV1-27A0A075B6S5 117 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 GYG2O15488 501 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 SRSF10O75494 262 aaKnown RBP13.5□□□□□ -0.25
VIM-204ENST00000478746 LY86O95711 162 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 OR3A1P47881 315 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 FUT6P51993 359 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 GK3PQ14409 553 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 HES1Q14469 280 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 UBE2V2Q15819 145 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 DEFB136Q30KP8 78 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 DNAL1Q4LDG9 190 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 FAM98BQ52LJ0 330 aaKnown RBP13.5□□□□□ -0.25
VIM-204ENST00000478746 Q6ZSR3 168 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 Q8IYB0 196 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 STPG2Q8N412 459 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 OR4D6Q8NGJ1 314 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 RPEQ96AT9 228 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 LYSTQ99698 3801 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 MOB1AQ9H8S9 216 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 PCDHB16Q9NRJ7 776 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 COPS3Q9UNS2 423 aa13.5□□□□□ -0.25
VIM-204ENST00000478746 SORL1Q92673 2214 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 FUOMA2VDF0 154 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 FGF16O43320 207 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 IGHG2P01859 326 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 RPLP1P05386 114 aaKnown RBP13.49□□□□□ -0.25
VIM-204ENST00000478746 TMEM11P17152 192 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 ACTR3P61158 418 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 CDK5Q00535 292 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 HNF4GQ14541 408 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 ZNF146Q15072 292 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 PNLIPRP3Q17RR3 467 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 ZNF260Q3ZCT1 412 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 ZFAND6Q6FIF0 208 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 FAM58AQ8N1B3 248 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 OR56B4Q8NH76 319 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 TOMM40LQ969M1 308 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 APOL4Q9BPW4 351 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 RBFOX1Q9NWB1 397 aaKnown RBP13.49□□□□□ -0.25
VIM-204ENST00000478746 R4GMQ9 66 aa13.49□□□□□ -0.25
VIM-204ENST00000478746 LINC01548A6NM66 108 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 SIRPB1O00241 398 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 CALCBP10092 127 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 CDX1P47902 265 aaPredicted RBP13.48□□□□□ -0.25
VIM-204ENST00000478746 GLIPR1P48060 266 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 NPBWR2P48146 333 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 SNU13P55769 128 aaKnown RBP13.48□□□□□ -0.25
VIM-204ENST00000478746 CDC42P60953 191 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 AESQ08117 197 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 CXorf66Q5JRM2 361 aaPredicted RBP13.48□□□□□ -0.25
VIM-204ENST00000478746 DHFR2Q86XF0 187 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 ARHGAP24Q8N264 748 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 DRAM1Q8N682 238 aa13.48□□□□□ -0.25
VIM-204ENST00000478746 SLC7A6OSQ96CW6 309 aaPredicted RBP13.48□□□□□ -0.25
VIM-204ENST00000478746 BORCS8Q96FH0 119 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms